Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC091305.2-201ENST00000624049 1576 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC068870.1-201ENST00000563737 2455 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AL031985.1-201ENST00000392713 418 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 EEF1B2P8-201ENST00000414101 671 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC093155.2-201ENST00000420734 937 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC007161.1-204ENST00000423039 460 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC006335.2-201ENST00000437993 330 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AZGP1P2-201ENST00000454506 345 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC093815.1-201ENST00000508637 280 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 RNU6-615P-201ENST00000516065 106 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 IGKV3D-34-201ENST00000522638 302 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC009237.13-201ENST00000603193 276 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AL031658.2-201ENST00000616850 651 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCSER1Q9C0I3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AC027279.1-201ENST00000568885 4284 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 DNM1P47-203ENST00000571780 12667 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 MTCO1P46-201ENST00000451639 1491 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AL009179.1-201ENST00000406085 265 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 RIMKLBP2-201ENST00000424737 654 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AC005297.1-201ENST00000444765 862 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 RN7SL197P-201ENST00000466981 299 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 UBFD1P1-201ENST00000473259 814 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 CR383656.1-201ENST00000484916 377 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AP001496.3-201ENST00000580230 913 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 H3F3BP2-201ENST00000583907 357 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AC018809.2-201ENST00000602436 3823 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AC025574.2-201ENST00000615621 514 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 AC015689.2-201ENST00000528172 1738 ntBASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.3□□□□□ -1.4
CCSER1Q9C0I3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 SRRM1P3-201ENST00000426911 2678 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 RNA5SP510-201ENST00000364697 99 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AC010740.1-201ENST00000417035 684 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AC113412.1-201ENST00000425840 504 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 LRRC37A14P-201ENST00000452297 462 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 PPIAP19-201ENST00000486414 492 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms