Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC8.39□□□□□ -1.07
SCAPERQ9BY12 AC006511.3-201ENST00000624929 1783 ntBASIC8.39□□□□□ -1.07
SCAPERQ9BY12 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 SNORA51.8-201ENST00000384234 132 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC116036.1-201ENST00000412199 367 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 MTND4LP17-201ENST00000414607 293 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC092647.3-201ENST00000443044 633 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC092324.1-201ENST00000468671 324 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC092490.3-201ENST00000545370 572 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AGGF1P7-201ENST00000562369 913 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC007346.2-201ENST00000564816 892 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC095055.1-201ENST00000603472 1113 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AL353662.3-201ENST00000625131 237 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AL162456.1-201ENST00000634535 2006 ntBASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.38□□□□□ -1.07
SCAPERQ9BY12 RNU4-64P-201ENST00000410795 131 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 RN7SKP147-201ENST00000517154 244 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC087385.3-201ENST00000620477 187 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC068138.1-201ENST00000412635 217 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC093655.2-201ENST00000425735 631 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 HCG14-201ENST00000444986 413 ntTSL 2 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC002075.1-201ENST00000457396 676 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AL121594.2-201ENST00000541658 472 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.37□□□□□ -1.07
SCAPERQ9BY12 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SCAPERQ9BY12 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 AC107980.1-201ENST00000558671 3355 ntBASIC8.36□□□□□ -1.07
SCAPERQ9BY12 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 OR4K12P-201ENST00000406538 961 ntBASIC8.36□□□□□ -1.07
SCAPERQ9BY12 RPL23AP18-201ENST00000416139 468 ntBASIC8.36□□□□□ -1.07
SCAPERQ9BY12 RN7SL738P-201ENST00000470264 297 ntBASIC8.36□□□□□ -1.07
SCAPERQ9BY12 AC093267.1-201ENST00000489176 961 ntBASIC8.36□□□□□ -1.07
SCAPERQ9BY12 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 AC139697.1-201ENST00000548429 745 ntBASIC8.36□□□□□ -1.07
SCAPERQ9BY12 PCNPP1-201ENST00000552501 511 ntBASIC8.36□□□□□ -1.07
SCAPERQ9BY12 AC063949.1-201ENST00000552900 865 ntBASIC8.36□□□□□ -1.07
SCAPERQ9BY12 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.36□□□□□ -1.07
SCAPERQ9BY12 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 AL034546.1-201ENST00000623740 3693 ntBASIC8.35□□□□□ -1.07
SCAPERQ9BY12 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCAPERQ9BY12 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms