Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Y_RNA.578-201ENST00000390903 88 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 YWHAZP4-201ENST00000392459 708 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AL136310.1-201ENST00000404926 654 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC008173.1-201ENST00000418901 264 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 RPS7P12-201ENST00000422385 582 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC239367.3-201ENST00000428996 814 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC098826.1-201ENST00000433943 471 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 MTCO2P18-201ENST00000457151 658 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 SRRM1P2-201ENST00000464531 1192 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC026254.2-201ENST00000475295 371 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC026826.1-201ENST00000493002 361 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC119751.1-201ENST00000513357 765 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AL121834.1-201ENST00000572284 509 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 SNORA70D-201ENST00000578836 135 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AL035411.2-201ENST00000604022 421 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC015540.1-201ENST00000615828 501 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 OR7E91P-202ENST00000642062 1198 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AP003486.1-201ENST00000525716 3994 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 BX005019.1-201ENST00000561881 1810 ntBASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SYNGAP1Q96PV0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 RNU5B-1-201ENST00000363286 116 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 RNU1-24P-201ENST00000364285 165 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 MIR188-201ENST00000385034 86 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 RPL7P27-201ENST00000403775 720 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AL589994.1-201ENST00000404962 340 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC007679.3-201ENST00000434035 414 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 Z99127.2-201ENST00000441426 334 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 RPL34P26-201ENST00000445636 354 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 RN7SL382P-201ENST00000482631 282 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC008638.1-201ENST00000506035 866 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC138938.1-201ENST00000515431 782 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 RNA5SP441-201ENST00000516809 88 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 NPM1P52-201ENST00000518264 846 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AP000916.1-201ENST00000533869 835 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AL591767.3-201ENST00000554632 525 ntBASIC7.54□□□□□ -1.2
SYNGAP1Q96PV0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms