Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 RNU1-150P-201ENST00000362491 162 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC079809.1-201ENST00000415468 276 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 AK4P4-201ENST00000419465 646 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 RNGTTP1-201ENST00000420965 728 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC019205.1-201ENST00000421830 730 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 BX323845.3-201ENST00000428215 527 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 CDY8P-201ENST00000428380 1279 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 AL136231.1-201ENST00000429407 730 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 KCTD9P1-201ENST00000430462 1167 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 CYCSP51-201ENST00000443545 318 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 CDY20P-201ENST00000447528 1279 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC093166.4-201ENST00000457867 318 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 HMGN2P36-201ENST00000529541 409 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 AP004609.2-201ENST00000532177 190 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 NANOGNBP2-201ENST00000544753 553 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 MIR4260-201ENST00000583107 67 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 NANOGP3-201ENST00000605855 286 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 OR8G3P-202ENST00000641572 1255 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 AC117409.1-201ENST00000470499 1310 ntBASIC5.37□□□□□ -1.55
COL21A1Q96P44 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 RNA5SP500-201ENST00000364486 119 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 RNU1-136P-201ENST00000384181 164 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 MIR1282-201ENST00000408865 101 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 OR7E116P-201ENST00000448529 957 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 AP006222.1-205ENST00000450734 457 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 RPSAP51-201ENST00000497462 645 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 AC021146.10-201ENST00000515628 706 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 MIR4433B-201ENST00000581329 102 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 AC010503.3-201ENST00000594355 540 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 MIR6133-201ENST00000617057 108 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 AL035661.1-201ENST00000620459 1144 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 NEPNP-201ENST00000404786 1371 ntBASIC5.36□□□□□ -1.55
COL21A1Q96P44 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.36□□□□□ -1.55
COL21A1Q96P44 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL21A1Q96P44 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.35□□□□□ -1.55
COL21A1Q96P44 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL21A1Q96P44 AC002525.1-201ENST00000624392 1622 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms