Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL512605.1-202ENST00000441919 381 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AL359955.2-201ENST00000445380 353 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC105420.1-201ENST00000504389 582 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 MTATP6P1-201ENST00000514057 681 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 SNORD46.2-201ENST00000516021 102 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 RN7SL753P-201ENST00000581238 290 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 LSM1P2-201ENST00000604911 322 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 AL136131.3-201ENST00000607600 188 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 KARSP1-201ENST00000451871 1752 ntBASIC5.82□□□□□ -1.48
C9orf72Q96LT7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.82□□□□□ -1.48
C9orf72Q96LT7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 OR52B3P-201ENST00000314715 928 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AL121886.1-201ENST00000358609 435 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 SNORA5.1-201ENST00000384275 131 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 RNA5SP284-201ENST00000384547 118 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AL354890.1-201ENST00000413730 346 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 DPPA2P2-201ENST00000418220 897 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 MTND6P12-201ENST00000428247 522 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 RPL31P15-201ENST00000449770 338 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 GEMIN2P1-201ENST00000454246 752 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AC093166.4-201ENST00000457867 318 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AL122020.1-201ENST00000472287 459 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AC026782.2-201ENST00000510845 636 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 IGLV3-30-201ENST00000524362 298 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AC012146.2-201ENST00000576545 416 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 MIR4776-2-201ENST00000580204 80 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 AL357153.4-201ENST00000620487 1016 ntBASIC5.81□□□□□ -1.48
C9orf72Q96LT7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
C9orf72Q96LT7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 RPS2P45-201ENST00000469997 2057 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 U3.28-201ENST00000391249 210 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 CDY17P-201ENST00000414121 1282 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 PCBP2P1-201ENST00000437262 977 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AL359265.1-201ENST00000440296 795 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 PPIAP20-201ENST00000449839 135 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AP006222.1-205ENST00000450734 457 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 OR2AF1P-201ENST00000454899 889 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 NXT1P1-201ENST00000458481 316 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 SNORD125-201ENST00000459538 96 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 PPIAP19-201ENST00000486414 492 ntBASIC5.8□□□□□ -1.48
C9orf72Q96LT7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
C9orf72Q96LT7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms