Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC087565.3-203ENST00000641018 837 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 ICE2P1-201ENST00000512800 1849 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC093849.1-201ENST00000563631 2209 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 AC114774.1-201ENST00000507410 1770 ntBASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC65Q8IXS2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC106872.5-201ENST00000508856 1416 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC127526.2-201ENST00000426436 775 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 RPL12P18-201ENST00000437175 325 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 ATP5LP5-201ENST00000483050 299 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC111000.6-201ENST00000514471 709 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 HSPE1P2-201ENST00000554777 306 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AP001496.3-201ENST00000580230 913 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 MIR4311-201ENST00000580794 100 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AL390318.1-201ENST00000624564 687 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 HSPD1P7-201ENST00000447985 1686 ntBASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC65Q8IXS2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CCDC65Q8IXS2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CCDC65Q8IXS2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.27□□□□□ -1.4
CCDC65Q8IXS2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
CCDC65Q8IXS2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 OR4F13P-202ENST00000560066 2054 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AC087516.1-201ENST00000561236 2428 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 PWAR1-201ENST00000624188 2414 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 SNORA64.1-201ENST00000362600 132 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 RNA5SP326-201ENST00000363209 110 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 MIR621-201ENST00000384919 96 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 SLC20A1P1-201ENST00000413906 956 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 VTI1BP4-201ENST00000427516 527 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 NANOGP9-201ENST00000439890 892 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 NXT1P1-201ENST00000458481 316 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 RPS23P6-201ENST00000466136 431 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 NDUFA5P5-201ENST00000468361 342 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AC087672.1-201ENST00000479876 766 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 PMS2P3-207ENST00000529061 717 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 DPPA2P4-201ENST00000563717 878 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AC005726.4-201ENST00000582858 458 ntBASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC65Q8IXS2 AC005618.4-201ENST00000625053 554 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 234.2 ms