Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL590399.2-201ENST00000427536 309 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 NPM1P25-201ENST00000429734 854 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 KATNBL1P2-201ENST00000433311 835 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AP000547.1-201ENST00000454360 617 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 RN7SL717P-201ENST00000478343 297 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AC074087.1-201ENST00000512059 724 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 TMEM97P2-201ENST00000517841 403 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL049872.1-201ENST00000556323 322 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AC012146.2-201ENST00000576545 416 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 MIR4505-201ENST00000582238 73 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AC008115.3-201ENST00000614874 549 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL161912.4-201ENST00000623889 2468 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL158152.1-201ENST00000602652 1435 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 GAPDHP24-201ENST00000328713 983 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 RNA5SP326-201ENST00000363209 110 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 RNA5SP242-201ENST00000364171 118 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 RNU1-136P-201ENST00000384181 164 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 RNU6-316P-201ENST00000391027 107 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC096921.1-201ENST00000411661 375 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 OR6E1P-201ENST00000414424 923 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 CHEK2P5-201ENST00000423877 246 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC073909.1-201ENST00000447112 999 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC023141.9-201ENST00000458734 412 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC093719.1-201ENST00000480427 441 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 RN7SL101P-201ENST00000496350 279 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 SNORA70.11-201ENST00000515987 138 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 SNORA70.13-201ENST00000516116 138 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 MRPS21P7-201ENST00000566937 238 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 MIR4311-201ENST00000580794 100 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC087821.1-201ENST00000623639 567 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AC069542.2-201ENST00000624816 216 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 AL449283.1-201ENST00000602631 3403 ntBASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
C9orf40Q8IXQ3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms