Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC108103.1-201ENST00000511286 446 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 OSBPL9P3-201ENST00000534523 595 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC090115.2-201ENST00000548060 883 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 GLRXP2-201ENST00000555594 321 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AL359091.2-201ENST00000609303 556 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 RNU6-1192P-201ENST00000612197 107 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 RFPL4AP6-201ENST00000616792 846 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 RNU6-489P-201ENST00000618289 107 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC068792.1-201ENST00000621354 417 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK3Q8IV63 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 AC022325.1-201ENST00000502748 2199 ntBASIC6.03□□□□□ -1.44
VRK3Q8IV63 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.03□□□□□ -1.44
VRK3Q8IV63 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 OFD1P17-201ENST00000437639 3018 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC027575.3-201ENST00000583058 2747 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC079753.1-201ENST00000623243 3868 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 RNA5SP375-201ENST00000362975 119 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 SNORA70H-201ENST00000383910 135 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 SNORA70J-201ENST00000384182 135 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 RNU6-40P-201ENST00000384254 107 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 MTND4LP13-201ENST00000425022 298 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 OR3D1P-201ENST00000438288 955 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 MTCYBP21-201ENST00000443300 1113 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 NPM1P19-201ENST00000450070 712 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 MTND1P27-201ENST00000451117 902 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 LRRC37A14P-201ENST00000452297 462 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AP002371.1-201ENST00000463604 433 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 CABYRP1-201ENST00000465493 1045 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC021006.1-201ENST00000489849 553 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AP002453.1-201ENST00000492327 668 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC091874.2-201ENST00000505889 720 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC090958.1-201ENST00000511122 351 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 SUMO2P19-201ENST00000518920 295 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 OR7E10P-201ENST00000526420 991 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 OR6M2P-201ENST00000529831 871 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC087468.1-201ENST00000604365 630 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC141002.1-201ENST00000607025 279 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC009779.8-202ENST00000607990 932 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC004241.3-201ENST00000611728 517 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 RN7SL261P-201ENST00000613441 282 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 VN1R9P-201ENST00000614184 867 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AC009318.3-201ENST00000616916 503 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 AL683826.1-201ENST00000624104 627 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.02□□□□□ -1.45
VRK3Q8IV63 ZNF402P-201ENST00000404435 3100 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 Z98755.1-201ENST00000407015 1384 ntBASIC6.02□□□□□ -1.45
VRK3Q8IV63 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms