Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC037479.1-201ENST00000558361 625 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC135628.1-201ENST00000568867 534 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 MIR4310-201ENST00000582950 57 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC020914.7-201ENST00000594477 545 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC096553.1-201ENST00000605169 829 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC012676.3-201ENST00000614983 479 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC061999.1-201ENST00000624454 177 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL121949.2-201ENST00000403446 1548 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 CASC19-243ENST00000641588 1546 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 RLIMP2-201ENST00000427891 1563 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 ZNF806-201ENST00000438300 1774 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 Y_RNA.77-201ENST00000362962 107 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 RPS3AP26-201ENST00000398259 784 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 RN7SKP222-201ENST00000410651 315 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 PAICSP7-201ENST00000419829 962 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AL139158.1-201ENST00000424719 340 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 RN7SL170P-201ENST00000487098 295 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 IGKV2D-10-201ENST00000520194 281 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 IGJP1-201ENST00000522682 475 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 SNRPCP6-201ENST00000528310 210 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 RFPL1S-203ENST00000539579 330 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 MIR3154-201ENST00000577829 84 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC004987.4-201ENST00000603383 338 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC012368.3-201ENST00000604190 219 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC011891.2-201ENST00000604949 397 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC004908.1-201ENST00000606572 541 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AP005137.2-201ENST00000609238 400 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC006338.2-201ENST00000616864 791 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AL359757.1-201ENST00000623176 255 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AL683826.1-201ENST00000624104 627 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC073593.1-201ENST00000624500 411 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 AC084035.1-201ENST00000634543 607 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 HYDIN2-203ENST00000614586 13885 ntBASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms