Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC007956.1-201ENST00000555623 542 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC027281.1-201ENST00000574178 758 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC134669.1-201ENST00000581275 672 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC090236.2-201ENST00000587933 1101 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC012213.4-201ENST00000606457 354 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC007620.3-201ENST00000608131 497 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AL355834.1-201ENST00000556602 3965 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC008627.1-201ENST00000517511 1704 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AL136131.1-201ENST00000406079 803 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 FAM204CP-201ENST00000424489 642 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC006455.6-201ENST00000426192 893 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AL162739.1-201ENST00000450606 307 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC022431.1-201ENST00000450941 438 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC124945.1-201ENST00000485133 188 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 CCDC11P1-201ENST00000503137 1162 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 CYCSP38-201ENST00000559840 322 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AP005119.1-201ENST00000580956 292 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC005244.1-201ENST00000582566 339 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC079315.1-201ENST00000602952 623 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 BX322635.1-201ENST00000605804 496 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC096708.4-201ENST00000620563 552 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC110792.3-201ENST00000595906 1614 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 AC239868.2-201ENST00000564237 4527 ntBASIC5.55□□□□□ -1.52
NUP54Q7Z3B4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 OR10R3P-201ENST00000361688 942 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 RNU6-386P-201ENST00000362650 107 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AL139039.2-201ENST00000407436 479 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 MYL6P5-201ENST00000412707 459 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 MAPRE1P3-201ENST00000435438 796 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 TUBB4BP6-201ENST00000437576 479 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AL445466.1-201ENST00000448432 357 ntBASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP54Q7Z3B4 STRADBP1-201ENST00000478954 1281 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms