Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 RPL21P18-201ENST00000469899 480 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC020898.1-201ENST00000474167 787 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 RPS17P11-201ENST00000474297 293 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 CYP4F27P-201ENST00000514557 494 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 RN7SKP287-201ENST00000516546 266 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 OR4C49P-201ENST00000563891 900 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AP002884.5-201ENST00000595053 1132 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC004890.3-201ENST00000605566 1095 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC093388.1-201ENST00000609166 430 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC005702.3-201ENST00000585345 1447 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 AC004023.1-201ENST00000561473 1744 ntBASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTCHD4Q6ZW05 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 MTCO1P28-201ENST00000574177 1528 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 FANCD2P2-201ENST00000437591 1400 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AL359715.4-201ENST00000606629 1436 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 SNORD16-201ENST00000362803 99 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 RNA5SP279-201ENST00000365513 117 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 RNU6-481P-201ENST00000384194 107 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 SNORA7A-201ENST00000384765 139 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 RNU6-796P-201ENST00000391086 107 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AL139184.1-202ENST00000422303 222 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC092634.2-201ENST00000428146 1010 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 MED6P1-201ENST00000439659 713 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 RPL6P30-201ENST00000443382 862 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 RPL36AP55-201ENST00000454114 305 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC019084.1-201ENST00000457337 432 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 RARRES2P3-201ENST00000457739 473 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 CBX1P5-201ENST00000475330 559 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC098583.1-201ENST00000480875 255 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC010343.2-201ENST00000510162 224 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 SNORA19.3-201ENST00000516165 130 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 MORF4L1P3-201ENST00000525966 950 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AL133399.1-201ENST00000527476 298 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AP004607.5-201ENST00000532034 217 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AL121839.1-201ENST00000556233 1185 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC090888.2-201ENST00000559765 1144 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 RN7SL475P-201ENST00000583379 298 ntBASIC5.69□□□□□ -1.5
PTCHD4Q6ZW05 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms