Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 RNA5SP46-201ENST00000362370 120 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 RMRPP5-201ENST00000411156 267 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 SDHDP6-201ENST00000414693 480 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC105384.2-201ENST00000508433 640 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC138866.2-201ENST00000508650 584 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 snoU109.5-201ENST00000516231 132 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 HMGN2P47-201ENST00000559378 272 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 RN7SL753P-201ENST00000581238 290 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC060780.2-201ENST00000589047 198 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 AC063977.5-201ENST00000601044 974 ntBASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFWD3Q6PCD5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 MIR323A-201ENST00000362199 86 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 OR2AT2P-201ENST00000413438 905 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC017078.1-201ENST00000416146 368 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AL513325.1-201ENST00000417716 1034 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 Z84478.1-201ENST00000438230 1219 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC005297.1-201ENST00000444765 862 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 OR7E116P-201ENST00000448529 957 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 RPS27AP2-201ENST00000457576 465 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 RN7SL72P-201ENST00000460697 269 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC079080.1-201ENST00000479841 822 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC073610.1-201ENST00000489971 396 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 DUTP1-201ENST00000493631 470 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 TMEM97P2-201ENST00000517841 403 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AP000619.2-201ENST00000546014 969 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 MIR4505-201ENST00000582238 73 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AL390318.1-201ENST00000624564 687 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC079776.5-201ENST00000641920 211 ntBASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
RFWD3Q6PCD5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 AL132656.3-201ENST00000606384 1595 ntBASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 OR6E1P-201ENST00000414424 923 ntBASIC5.9□□□□□ -1.46
RFWD3Q6PCD5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms