Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 YWHAZP6-201ENST00000399764 738 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 AL121878.1-201ENST00000418638 859 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 RIMKLBP2-201ENST00000424737 654 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 IGBP1P3-201ENST00000447449 1000 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX4Q33E94 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC098818.1-201ENST00000478593 252 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AC099521.1-201ENST00000482557 334 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 RNU6-1334P-201ENST00000516032 105 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX4Q33E94 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX4Q33E94 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC091078.2-201ENST00000557145 559 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AC093591.2-201ENST00000565254 3843 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 RN7SL290P-201ENST00000578661 300 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC127024.5-201ENST00000580085 462 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AP005119.1-201ENST00000580956 292 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AC011500.1-201ENST00000601963 469 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 AL034374.2-201ENST00000605281 548 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 uc_338.29-201ENST00000615099 168 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX4Q33E94 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RFX4Q33E94 MTCO1P7-201ENST00000419523 1542 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 PSG10P-201ENST00000501199 1500 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 HSPD1P9-201ENST00000420325 1636 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AC008627.1-201ENST00000517511 1704 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AL359715.3-201ENST00000569267 2123 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RFX4Q33E94 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX4Q33E94 RNA5SP326-201ENST00000363209 110 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 MIR130A-201ENST00000385274 89 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AC016739.1-201ENST00000405359 345 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 GNG5P5-201ENST00000420444 220 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 FAM183DP-201ENST00000421987 399 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AL139158.1-201ENST00000424719 340 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX4Q33E94 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX4Q33E94 NANOGP9-201ENST00000439890 892 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AC016772.1-201ENST00000444170 1261 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AL161722.1-201ENST00000446972 1032 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 RN7SL568P-201ENST00000493069 298 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 KATNBL1P4-201ENST00000503545 918 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX4Q33E94 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.23□□□□□ -1.57
RFX4Q33E94 AP003033.2-201ENST00000528901 805 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 PMS2P3-207ENST00000529061 717 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 OR4A41P-201ENST00000533053 928 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.23□□□□□ -1.57
RFX4Q33E94 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX4Q33E94 AC005244.1-201ENST00000582566 339 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.23□□□□□ -1.57
RFX4Q33E94 AL136131.3-201ENST00000607600 188 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 Z95327.3-201ENST00000610385 572 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 AC091932.2-201ENST00000623014 291 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 OR11H2-202ENST00000641517 1085 ntBASIC5.23□□□□□ -1.57
RFX4Q33E94 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX4Q33E94 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RFX4Q33E94 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RFX4Q33E94 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX4Q33E94 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RFX4Q33E94 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RFX4Q33E94 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 MUC2-202ENST00000613187 4845 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.22□□□□□ -1.57
RFX4Q33E94 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX4Q33E94 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RFX4Q33E94 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.22□□□□□ -1.57
RFX4Q33E94 RPL7AP49-201ENST00000429522 581 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 AL591438.1-201ENST00000433508 581 ntBASIC5.22□□□□□ -1.57
RFX4Q33E94 GAPDHP59-201ENST00000435908 267 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms