Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2BQ00403 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.06□□□□□ -1.44
GTF2BQ00403 AC012075.1-201ENST00000436549 580 ntBASIC6.06□□□□□ -1.44
GTF2BQ00403 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.06□□□□□ -1.44
GTF2BQ00403 IGBP1P3-201ENST00000447449 1000 ntBASIC6.06□□□□□ -1.44
GTF2BQ00403 AL358876.1-201ENST00000453364 1075 ntBASIC6.06□□□□□ -1.44
GTF2BQ00403 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.06□□□□□ -1.44
GTF2BQ00403 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.06□□□□□ -1.44
GTF2BQ00403 RN7SL284P-201ENST00000498823 275 ntBASIC6.06□□□□□ -1.44
GTF2BQ00403 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.06□□□□□ -1.44
GTF2BQ00403 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.06□□□□□ -1.44
GTF2BQ00403 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.06□□□□□ -1.44
GTF2BQ00403 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.06□□□□□ -1.44
GTF2BQ00403 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.06□□□□□ -1.44
GTF2BQ00403 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2BQ00403 AC012146.2-201ENST00000576545 416 ntBASIC6.06□□□□□ -1.44
GTF2BQ00403 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.06□□□□□ -1.44
GTF2BQ00403 MIR4420-201ENST00000583944 77 ntBASIC6.06□□□□□ -1.44
GTF2BQ00403 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2BQ00403 AC010245.2-201ENST00000606908 1167 ntBASIC6.06□□□□□ -1.44
GTF2BQ00403 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2BQ00403 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
GTF2BQ00403 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2BQ00403 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2BQ00403 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
GTF2BQ00403 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2BQ00403 AC104964.3-201ENST00000606115 2860 ntBASIC6.06□□□□□ -1.44
GTF2BQ00403 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2BQ00403 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
GTF2BQ00403 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
GTF2BQ00403 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.06□□□□□ -1.44
GTF2BQ00403 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
GTF2BQ00403 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF2BQ00403 Z95114.1-201ENST00000624264 14574 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
GTF2BQ00403 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
GTF2BQ00403 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2BQ00403 RN7SKP185-201ENST00000362813 326 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 RNA5SP234-201ENST00000363916 119 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2BQ00403 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.05□□□□□ -1.44
GTF2BQ00403 AL391987.1-201ENST00000441025 200 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 CYCSP51-201ENST00000443545 318 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 RANP1-206ENST00000455094 651 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2BQ00403 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF2BQ00403 PPP1R11P1-201ENST00000486095 376 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 OR4A17P-201ENST00000526032 904 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF2BQ00403 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
GTF2BQ00403 AC004477.3-201ENST00000614061 590 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
GTF2BQ00403 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF2BQ00403 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
GTF2BQ00403 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.05□□□□□ -1.44
GTF2BQ00403 AC144833.1-201ENST00000567953 4089 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2BQ00403 SAMMSON-210ENST00000641260 1308 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
GTF2BQ00403 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2BQ00403 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2BQ00403 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF2BQ00403 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2BQ00403 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2BQ00403 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2BQ00403 RNA5SP435-201ENST00000364044 108 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF2BQ00403 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 RN7SKP206-201ENST00000410823 293 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF2BQ00403 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.04□□□□□ -1.44
GTF2BQ00403 AC099670.2-201ENST00000435130 321 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.04□□□□□ -1.44
GTF2BQ00403 RPL35AP19-201ENST00000469425 329 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 AC090638.1-201ENST00000498296 909 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF2BQ00403 AC091912.1-201ENST00000511351 248 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 IGKV2-19-201ENST00000518132 283 ntBASIC6.04□□□□□ -1.44
GTF2BQ00403 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.04□□□□□ -1.44
GTF2BQ00403 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms