Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3AP84243 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
H3F3AP84243 RNA5SP284-201ENST00000384547 118 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC242426.1-201ENST00000435270 960 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 RN7SL284P-201ENST00000498823 275 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 RNU6-615P-201ENST00000516065 106 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 CYCSP22-201ENST00000517555 339 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 TRIM51DP-201ENST00000529746 596 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC137627.1-201ENST00000545761 289 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
H3F3AP84243 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3AP84243 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3AP84243 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.08□□□□□ -1.6
H3F3AP84243 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.08□□□□□ -1.6
H3F3AP84243 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
H3F3AP84243 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 AL031595.2-201ENST00000624215 19071 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
H3F3AP84243 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
H3F3AP84243 RPS2P45-201ENST00000469997 2057 ntBASIC5.08□□□□□ -1.6
H3F3AP84243 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
H3F3AP84243 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
H3F3AP84243 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.07□□□□□ -1.6
H3F3AP84243 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
H3F3AP84243 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 RNA5SP131-201ENST00000365452 119 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 RN7SKP81-201ENST00000365603 331 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
H3F3AP84243 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3F3AP84243 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3F3AP84243 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3F3AP84243 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.07□□□□□ -1.6
H3F3AP84243 CDY17P-201ENST00000414121 1282 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 BMS1P17-202ENST00000416720 316 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 RPL34P3-201ENST00000421454 338 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 IPPKP1-201ENST00000422501 768 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AC002069.1-201ENST00000429649 1159 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.07□□□□□ -1.6
H3F3AP84243 AC005297.1-201ENST00000444765 862 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 MRE11P1-201ENST00000464884 2127 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
H3F3AP84243 RPL12P24-201ENST00000474907 486 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AC087672.1-201ENST00000479876 766 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 DEFB109A-201ENST00000482450 265 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.07□□□□□ -1.6
H3F3AP84243 OR7E157P-201ENST00000494376 911 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AC090568.1-201ENST00000509499 856 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 IGBP1P1-201ENST00000554337 1009 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.07□□□□□ -1.6
H3F3AP84243 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.07□□□□□ -1.6
H3F3AP84243 AC135626.1-201ENST00000556983 435 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.07□□□□□ -1.6
H3F3AP84243 AC015982.1-201ENST00000608113 465 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.07□□□□□ -1.6
H3F3AP84243 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
H3F3AP84243 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
H3F3AP84243 LINC01963-201ENST00000562038 3148 ntBASIC5.07□□□□□ -1.6
H3F3AP84243 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.07□□□□□ -1.6
H3F3AP84243 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
H3F3AP84243 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3AP84243 AC004158.1-201ENST00000564508 4319 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 AC125336.1-201ENST00000508893 2827 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
H3F3AP84243 AC011933.2-201ENST00000578539 2790 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms