Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
AP1S1P61966 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.69□□□□□ -1.5
AP1S1P61966 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
AP1S1P61966 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 AC027279.1-201ENST00000568885 4284 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 AL359955.1-201ENST00000455242 3275 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
AP1S1P61966 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.69□□□□□ -1.5
AP1S1P61966 AC114786.1-201ENST00000512892 1415 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 BCORP1-203ENST00000513194 5093 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.69□□□□□ -1.5
AP1S1P61966 RNA5SP435-201ENST00000364044 108 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 RN7SKP293-201ENST00000411389 296 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AC017078.1-201ENST00000416146 368 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.69□□□□□ -1.5
AP1S1P61966 OR10T1P-201ENST00000424327 947 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.69□□□□□ -1.5
AP1S1P61966 CYCSP51-201ENST00000443545 318 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.69□□□□□ -1.5
AP1S1P61966 snoU13.29-201ENST00000459370 104 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 RN7SL72P-201ENST00000460697 269 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.69□□□□□ -1.5
AP1S1P61966 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.69□□□□□ -1.5
AP1S1P61966 IGLV3-24-201ENST00000517477 197 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AC137627.1-201ENST00000545761 289 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.69□□□□□ -1.5
AP1S1P61966 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 PPATP2-201ENST00000605635 508 ntBASIC5.69□□□□□ -1.5
AP1S1P61966 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.69□□□□□ -1.5
AP1S1P61966 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.69□□□□□ -1.5
AP1S1P61966 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.69□□□□□ -1.5
AP1S1P61966 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.69□□□□□ -1.5
AP1S1P61966 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
AP1S1P61966 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 AC005261.6-201ENST00000623072 1387 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 GAPDHP24-201ENST00000328713 983 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.68□□□□□ -1.5
AP1S1P61966 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.68□□□□□ -1.5
AP1S1P61966 FMO7P-201ENST00000436045 768 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 NANOGP9-201ENST00000439890 892 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 YWHAEP1-201ENST00000453697 763 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 LDHBP2-201ENST00000456969 1005 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 SNORD125-201ENST00000459538 96 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 AC074087.1-201ENST00000512059 724 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.68□□□□□ -1.5
AP1S1P61966 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.68□□□□□ -1.5
AP1S1P61966 AC022404.1-201ENST00000555320 273 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.68□□□□□ -1.5
AP1S1P61966 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.68□□□□□ -1.5
AP1S1P61966 FO393422.1-201ENST00000603908 708 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 AL691477.1-201ENST00000624398 162 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
AP1S1P61966 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.68□□□□□ -1.5
AP1S1P61966 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
AP1S1P61966 AC123769.1-201ENST00000530992 3192 ntBASIC5.68□□□□□ -1.5
AP1S1P61966 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.68□□□□□ -1.5
AP1S1P61966 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AP1S1P61966 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
AP1S1P61966 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.67□□□□□ -1.5
AP1S1P61966 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.67□□□□□ -1.5
AP1S1P61966 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.67□□□□□ -1.5
AP1S1P61966 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP1S1P61966 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP1S1P61966 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP1S1P61966 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.67□□□□□ -1.5
AP1S1P61966 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP1S1P61966 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP1S1P61966 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP1S1P61966 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.67□□□□□ -1.5
AP1S1P61966 HSPD1P7-201ENST00000447985 1686 ntBASIC5.67□□□□□ -1.5
AP1S1P61966 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AP1S1P61966 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms