Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC139697.1-201ENST00000548429 745 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGCS2P54868 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGCS2P54868 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGCS2P54868 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGCS2P54868 WBP1LP8-201ENST00000617401 327 ntBASIC6.45□□□□□ -1.38
HMGCS2P54868 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGCS2P54868 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGCS2P54868 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGCS2P54868 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGCS2P54868 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HMGCS2P54868 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGCS2P54868 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HMGCS2P54868 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
HMGCS2P54868 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGCS2P54868 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HMGCS2P54868 AC016251.2-201ENST00000623393 3089 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HMGCS2P54868 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 RNA5SP443-201ENST00000363083 132 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 MIR550A3-201ENST00000390735 95 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 AL645733.1-201ENST00000402250 217 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 AL133270.1-201ENST00000402635 279 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 AL121835.1-201ENST00000404250 354 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 AL133388.1-201ENST00000404509 287 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.44□□□□□ -1.38
HMGCS2P54868 PRUNEP1-201ENST00000425846 705 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 DSTNP5-201ENST00000427921 523 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 RPL7P61-201ENST00000451721 751 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 AC091685.2-201ENST00000454924 864 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 RPS7P6-201ENST00000485777 579 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.44□□□□□ -1.38
HMGCS2P54868 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.44□□□□□ -1.38
HMGCS2P54868 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGCS2P54868 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.44□□□□□ -1.38
HMGCS2P54868 MIR6748-201ENST00000610433 71 ntBASIC6.44□□□□□ -1.38
HMGCS2P54868 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HMGCS2P54868 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGCS2P54868 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HMGCS2P54868 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.44□□□□□ -1.38
HMGCS2P54868 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HMGCS2P54868 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HMGCS2P54868 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGCS2P54868 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGCS2P54868 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGCS2P54868 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGCS2P54868 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGCS2P54868 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HMGCS2P54868 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
HMGCS2P54868 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HMGCS2P54868 SNORA67-201ENST00000384423 137 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 AL009179.1-201ENST00000406085 265 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 RN7SKP216-201ENST00000411050 312 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 CRIP1P1-201ENST00000427567 185 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGCS2P54868 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGCS2P54868 CEACAMP7-201ENST00000444105 496 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 BX284632.1-201ENST00000478218 541 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGCS2P54868 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.43□□□□□ -1.38
HMGCS2P54868 RNU6-941P-201ENST00000516346 108 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGCS2P54868 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGCS2P54868 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HMGCS2P54868 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGCS2P54868 AC006115.2-201ENST00000596823 202 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 AC133644.2-201ENST00000608142 540 ntBASIC6.43□□□□□ -1.38
HMGCS2P54868 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGCS2P54868 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HMGCS2P54868 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGCS2P54868 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.43□□□□□ -1.38
HMGCS2P54868 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGCS2P54868 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGCS2P54868 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGCS2P54868 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGCS2P54868 WBP11P1-201ENST00000562560 1931 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGCS2P54868 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGCS2P54868 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGCS2P54868 RNU1-43P-201ENST00000365052 165 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 SNORA70H-201ENST00000383910 135 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 SNORA70J-201ENST00000384182 135 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 RPS3AP38-201ENST00000435889 763 ntBASIC6.42□□□□□ -1.38
HMGCS2P54868 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGCS2P54868 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGCS2P54868 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGCS2P54868 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms