Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
NUP98P52948 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
NUP98P52948 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
NUP98P52948 SNORA17.1-201ENST00000362945 126 ntBASIC6.78□□□□□ -1.32
NUP98P52948 RNU1-59P-201ENST00000364829 162 ntBASIC6.78□□□□□ -1.32
NUP98P52948 RIMKLBP2-201ENST00000424737 654 ntBASIC6.78□□□□□ -1.32
NUP98P52948 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.78□□□□□ -1.32
NUP98P52948 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.78□□□□□ -1.32
NUP98P52948 RPL7P61-201ENST00000451721 751 ntBASIC6.78□□□□□ -1.32
NUP98P52948 RN7SL860P-201ENST00000473738 223 ntBASIC6.78□□□□□ -1.32
NUP98P52948 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.78□□□□□ -1.32
NUP98P52948 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 EIF3KP3-201ENST00000514461 639 ntBASIC6.78□□□□□ -1.32
NUP98P52948 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.78□□□□□ -1.32
NUP98P52948 AC239803.2-201ENST00000610161 430 ntBASIC6.78□□□□□ -1.32
NUP98P52948 U1.25-201ENST00000614085 162 ntBASIC6.78□□□□□ -1.32
NUP98P52948 U1.34-201ENST00000618578 162 ntBASIC6.78□□□□□ -1.32
NUP98P52948 U1.31-201ENST00000620022 160 ntBASIC6.78□□□□□ -1.32
NUP98P52948 AC087385.3-201ENST00000620477 187 ntBASIC6.78□□□□□ -1.32
NUP98P52948 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
NUP98P52948 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
NUP98P52948 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.78□□□□□ -1.32
NUP98P52948 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.78□□□□□ -1.32
NUP98P52948 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.78□□□□□ -1.32
NUP98P52948 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
NUP98P52948 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NUP98P52948 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NUP98P52948 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
NUP98P52948 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NUP98P52948 SNURFL-201ENST00000309296 343 ntBASIC6.77□□□□□ -1.33
NUP98P52948 RN7SKP95-201ENST00000362860 303 ntBASIC6.77□□□□□ -1.33
NUP98P52948 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.77□□□□□ -1.33
NUP98P52948 AC109462.1-201ENST00000491087 368 ntBASIC6.77□□□□□ -1.33
NUP98P52948 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.77□□□□□ -1.33
NUP98P52948 GAPDHP62-201ENST00000515313 990 ntBASIC6.77□□□□□ -1.33
NUP98P52948 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.77□□□□□ -1.33
NUP98P52948 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NUP98P52948 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.77□□□□□ -1.33
NUP98P52948 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NUP98P52948 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
NUP98P52948 AC016251.2-201ENST00000623393 3089 ntBASIC6.77□□□□□ -1.33
NUP98P52948 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NUP98P52948 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
NUP98P52948 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
NUP98P52948 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
NUP98P52948 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NUP98P52948 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
NUP98P52948 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUP98P52948 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.76□□□□□ -1.33
NUP98P52948 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.76□□□□□ -1.33
NUP98P52948 AL009179.1-201ENST00000406085 265 ntBASIC6.76□□□□□ -1.33
NUP98P52948 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.76□□□□□ -1.33
NUP98P52948 AL390879.1-201ENST00000439143 386 ntBASIC6.76□□□□□ -1.33
NUP98P52948 SNORD125-201ENST00000459538 96 ntBASIC6.76□□□□□ -1.33
NUP98P52948 RN7SL188P-201ENST00000469842 285 ntBASIC6.76□□□□□ -1.33
NUP98P52948 AC013701.1-201ENST00000522657 465 ntBASIC6.76□□□□□ -1.33
NUP98P52948 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.76□□□□□ -1.33
NUP98P52948 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.76□□□□□ -1.33
NUP98P52948 MTCO1P1-201ENST00000624263 1081 ntBASIC6.76□□□□□ -1.33
NUP98P52948 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.76□□□□□ -1.33
NUP98P52948 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUP98P52948 MAPK10-371ENST00000641952 5209 ntBASIC6.76□□□□□ -1.33
NUP98P52948 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUP98P52948 NBPF8-201ENST00000583271 5330 ntBASIC6.76□□□□□ -1.33
NUP98P52948 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
NUP98P52948 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUP98P52948 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUP98P52948 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NUP98P52948 AL117378.2-201ENST00000622916 1337 ntBASIC6.76□□□□□ -1.33
NUP98P52948 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUP98P52948 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.76□□□□□ -1.33
NUP98P52948 NIPA2P1-201ENST00000426223 976 ntBASIC6.76□□□□□ -1.33
NUP98P52948 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NUP98P52948 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.76□□□□□ -1.33
NUP98P52948 RPS3AP41-201ENST00000462701 778 ntBASIC6.76□□□□□ -1.33
NUP98P52948 AC097484.1-201ENST00000471148 389 ntBASIC6.76□□□□□ -1.33
NUP98P52948 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.76□□□□□ -1.33
NUP98P52948 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.76□□□□□ -1.33
NUP98P52948 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.76□□□□□ -1.33
NUP98P52948 AC134349.2-201ENST00000535136 910 ntBASIC6.76□□□□□ -1.33
NUP98P52948 NPM1P42-201ENST00000560329 862 ntBASIC6.76□□□□□ -1.33
NUP98P52948 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.76□□□□□ -1.33
NUP98P52948 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.76□□□□□ -1.33
NUP98P52948 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
NUP98P52948 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NUP98P52948 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.75□□□□□ -1.33
NUP98P52948 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.75□□□□□ -1.33
NUP98P52948 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NUP98P52948 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.75□□□□□ -1.33
NUP98P52948 RNA5SP305-201ENST00000362665 119 ntBASIC6.75□□□□□ -1.33
NUP98P52948 AL451142.1-201ENST00000375867 775 ntBASIC6.75□□□□□ -1.33
NUP98P52948 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.75□□□□□ -1.33
NUP98P52948 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms