Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CLCN3P51790 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CLCN3P51790 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CLCN3P51790 MIR1178-201ENST00000408396 91 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.25□□□□□ -1.41
CLCN3P51790 AC013268.2-201ENST00000420753 337 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.25□□□□□ -1.41
CLCN3P51790 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.25□□□□□ -1.41
CLCN3P51790 CFL1P1-202ENST00000432948 411 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 AC019185.1-201ENST00000442718 389 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.25□□□□□ -1.41
CLCN3P51790 MTCYBP14-201ENST00000457471 715 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 AC100832.1-201ENST00000471945 383 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.25□□□□□ -1.41
CLCN3P51790 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.25□□□□□ -1.41
CLCN3P51790 AC126615.2-201ENST00000553003 515 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.25□□□□□ -1.41
CLCN3P51790 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 AC245128.3-201ENST00000594721 748 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 PPATP2-201ENST00000605635 508 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 AL133406.3-201ENST00000606817 541 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 AL359513.1-201ENST00000614364 557 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 CASC19-248ENST00000641674 1356 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 SNX18P3-202ENST00000565670 1750 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 AC011933.2-201ENST00000578539 2790 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.25□□□□□ -1.41
CLCN3P51790 THAP12P8-201ENST00000447914 2115 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 AC025470.1-201ENST00000510053 2032 ntBASIC6.25□□□□□ -1.41
CLCN3P51790 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLCN3P51790 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.25□□□□□ -1.41
CLCN3P51790 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.25□□□□□ -1.41
CLCN3P51790 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.24□□□□□ -1.41
CLCN3P51790 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 AC073365.1-203ENST00000641055 1992 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.24□□□□□ -1.41
CLCN3P51790 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CLCN3P51790 RNA5SP91-201ENST00000390902 119 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 AL050305.1-201ENST00000399993 1230 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 GAPDHP42-201ENST00000406848 981 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.24□□□□□ -1.41
CLCN3P51790 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.24□□□□□ -1.41
CLCN3P51790 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.24□□□□□ -1.41
CLCN3P51790 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.24□□□□□ -1.41
CLCN3P51790 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.24□□□□□ -1.41
CLCN3P51790 HMGN1P8-201ENST00000463578 288 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 DEFB109A-201ENST00000482450 265 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.24□□□□□ -1.41
CLCN3P51790 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.24□□□□□ -1.41
CLCN3P51790 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.24□□□□□ -1.41
CLCN3P51790 IGLV3-24-201ENST00000517477 197 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.24□□□□□ -1.41
CLCN3P51790 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.24□□□□□ -1.41
CLCN3P51790 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.24□□□□□ -1.41
CLCN3P51790 AC015720.2-201ENST00000567709 334 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 NPM1P45-201ENST00000583151 559 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.24□□□□□ -1.41
CLCN3P51790 AC006115.2-201ENST00000596823 202 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.24□□□□□ -1.41
CLCN3P51790 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 CR788268.1-201ENST00000603931 1809 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CLCN3P51790 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
CLCN3P51790 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.24□□□□□ -1.41
CLCN3P51790 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 AC027279.1-201ENST00000568885 4284 ntBASIC6.24□□□□□ -1.41
CLCN3P51790 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CLCN3P51790 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLCN3P51790 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms