Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC006499.4-201ENST00000510947 694 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 RNA5SP271-201ENST00000516700 88 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 SNORA70.20-201ENST00000516848 126 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC005363.1-201ENST00000530779 351 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC027026.1-201ENST00000532323 742 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC084824.2-201ENST00000548906 345 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC096996.1-201ENST00000563813 325 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AL096712.1-201ENST00000614561 159 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 AL035661.1-201ENST00000620459 1144 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC138907.8-201ENST00000623981 2256 ntBASIC5.08□□□□□ -1.6
CSNK1A1P48729 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CSNK1A1P48729 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSNK1A1P48729 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC093909.5-201ENST00000621839 1799 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 OR7E25P-201ENST00000344844 931 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC023490.2-201ENST00000359859 470 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 OR7E101P-201ENST00000400428 513 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC245060.4-201ENST00000413293 1121 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AL512637.1-201ENST00000439523 1231 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC073072.2-201ENST00000447425 348 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 AP006222.1-205ENST00000450734 457 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC090602.1-201ENST00000469695 252 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC021678.3-201ENST00000517893 476 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AL353729.2-201ENST00000605859 1249 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC022919.1-201ENST00000624979 626 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AC129915.3-201ENST00000634128 948 ntBASIC5.07□□□□□ -1.6
CSNK1A1P48729 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSNK1A1P48729 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.07□□□□□ -1.6
CSNK1A1P48729 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CSNK1A1P48729 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 AL159987.1-201ENST00000347911 293 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 U3.10-201ENST00000364459 214 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 RNU1-136P-201ENST00000384181 164 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 RPS3AP2-201ENST00000407190 754 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 HMGN1P20-201ENST00000411849 300 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSNK1A1P48729 AL354766.1-201ENST00000423396 542 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 AL022331.1-201ENST00000429025 477 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.06□□□□□ -1.6
CSNK1A1P48729 TMEM183AP1-205ENST00000432739 290 ntBASIC5.06□□□□□ -1.6
CSNK1A1P48729 GAPDHP48-201ENST00000436626 961 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms