Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPN9P43378 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN9P43378 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 AL358178.1-201ENST00000407698 397 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 MIR1203-201ENST00000408812 85 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.07□□□□□ -1.44
PTPN9P43378 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 AL590399.2-201ENST00000427536 309 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN9P43378 AP000949.1-201ENST00000438328 629 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN9P43378 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 MTND5P8-201ENST00000449817 1083 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPN9P43378 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.07□□□□□ -1.44
PTPN9P43378 RPS17P15-201ENST00000475609 349 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 AC105384.2-201ENST00000508433 640 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN9P43378 TRIM77BP-201ENST00000524985 1119 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 HMGN2P36-201ENST00000529541 409 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN9P43378 AL136520.1-202ENST00000555494 763 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN9P43378 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN9P43378 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 AL513327.3-201ENST00000602618 469 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 RPL12P48-201ENST00000605620 304 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 NANOGP3-201ENST00000605855 286 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.07□□□□□ -1.44
PTPN9P43378 FO681491.1-202ENST00000623392 737 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 AP001153.1-201ENST00000641024 338 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTPN9P43378 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 AL591135.1-201ENST00000401578 5914 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 AL158152.1-201ENST00000602652 1435 ntBASIC6.07□□□□□ -1.44
PTPN9P43378 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.07□□□□□ -1.44
PTPN9P43378 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTPN9P43378 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN9P43378 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN9P43378 AC087516.1-201ENST00000561236 2428 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTPN9P43378 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTPN9P43378 MFSD8-219ENST00000641228 2559 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 TMSB4XP2-201ENST00000335179 210 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 RNU6-618P-201ENST00000363518 112 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN9P43378 OR7E156P-201ENST00000400303 464 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN9P43378 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 AC066692.1-201ENST00000421721 457 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 AL035660.1-201ENST00000422041 222 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 VN1R21P-201ENST00000426703 765 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN9P43378 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 PCBP2P1-201ENST00000437262 977 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 AL606490.8-201ENST00000441624 319 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 AC009963.4-201ENST00000448535 339 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 MORF4L1P4-201ENST00000450245 976 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 snoU13.29-201ENST00000459370 104 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 ST13P12-201ENST00000508958 1094 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN9P43378 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN9P43378 IGKV2-19-201ENST00000518132 283 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN9P43378 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 AP001284.1-201ENST00000528393 2118 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN9P43378 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms