Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ATG4AP1-201ENST00000416893 538 ntBASIC5.85□□□□□ -1.47
HTTP42858 TXNP5-201ENST00000441043 315 ntBASIC5.85□□□□□ -1.47
HTTP42858 snoU13.1-201ENST00000459157 104 ntBASIC5.85□□□□□ -1.47
HTTP42858 GAPDHP56-201ENST00000506031 988 ntBASIC5.85□□□□□ -1.47
HTTP42858 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.85□□□□□ -1.47
HTTP42858 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 AC016251.2-201ENST00000623393 3089 ntBASIC5.85□□□□□ -1.47
HTTP42858 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.85□□□□□ -1.47
HTTP42858 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.85□□□□□ -1.47
HTTP42858 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.85□□□□□ -1.47
HTTP42858 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HTTP42858 AP002530.1-201ENST00000405705 684 ntBASIC5.85□□□□□ -1.47
HTTP42858 SNORA11F-201ENST00000408237 128 ntBASIC5.85□□□□□ -1.47
HTTP42858 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.85□□□□□ -1.47
HTTP42858 AC105129.1-201ENST00000560250 297 ntBASIC5.85□□□□□ -1.47
HTTP42858 AC008814.1-201ENST00000603797 406 ntBASIC5.85□□□□□ -1.47
HTTP42858 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
HTTP42858 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HTTP42858 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.85□□□□□ -1.47
HTTP42858 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC5.85□□□□□ -1.47
HTTP42858 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HTTP42858 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.85□□□□□ -1.47
HTTP42858 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
HTTP42858 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HTTP42858 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.84□□□□□ -1.47
HTTP42858 RNA5SP171-201ENST00000391071 115 ntBASIC5.84□□□□□ -1.47
HTTP42858 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HTTP42858 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.84□□□□□ -1.47
HTTP42858 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.84□□□□□ -1.47
HTTP42858 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.84□□□□□ -1.47
HTTP42858 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.84□□□□□ -1.47
HTTP42858 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.84□□□□□ -1.47
HTTP42858 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.84□□□□□ -1.47
HTTP42858 AC093765.1-201ENST00000603758 881 ntBASIC5.84□□□□□ -1.47
HTTP42858 AL356218.2-201ENST00000605264 187 ntBASIC5.84□□□□□ -1.47
HTTP42858 AC073869.8-201ENST00000641806 335 ntBASIC5.84□□□□□ -1.47
HTTP42858 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.84□□□□□ -1.47
HTTP42858 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HTTP42858 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HTTP42858 MON2-214ENST00000641654 10382 ntBASIC5.84□□□□□ -1.47
HTTP42858 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HTTP42858 RNA5SP191-201ENST00000362585 102 ntBASIC5.84□□□□□ -1.47
HTTP42858 MIR129-1-201ENST00000384972 72 ntBASIC5.84□□□□□ -1.47
HTTP42858 AL050305.1-201ENST00000399993 1230 ntBASIC5.84□□□□□ -1.47
HTTP42858 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HTTP42858 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HTTP42858 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.84□□□□□ -1.47
HTTP42858 AL121873.1-201ENST00000616013 524 ntBASIC5.84□□□□□ -1.47
HTTP42858 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HTTP42858 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.84□□□□□ -1.48
HTTP42858 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HTTP42858 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HTTP42858 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
HTTP42858 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HTTP42858 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.48
HTTP42858 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.83□□□□□ -1.48
HTTP42858 AC007568.1-201ENST00000422912 471 ntBASIC5.83□□□□□ -1.48
HTTP42858 CENPIP1-201ENST00000425713 902 ntBASIC5.83□□□□□ -1.48
HTTP42858 AL158073.1-201ENST00000426848 1104 ntBASIC5.83□□□□□ -1.48
HTTP42858 AL451062.2-201ENST00000427515 271 ntBASIC5.83□□□□□ -1.48
HTTP42858 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 AP001880.2-201ENST00000538233 448 ntBASIC5.83□□□□□ -1.48
HTTP42858 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.83□□□□□ -1.48
HTTP42858 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HTTP42858 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.83□□□□□ -1.48
HTTP42858 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HTTP42858 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HTTP42858 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HTTP42858 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HTTP42858 MIR208A-201ENST00000362287 71 ntBASIC5.83□□□□□ -1.48
HTTP42858 RSU1P3-201ENST00000412878 835 ntBASIC5.83□□□□□ -1.48
HTTP42858 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.83□□□□□ -1.48
HTTP42858 RPS17P5-201ENST00000498293 408 ntBASIC5.83□□□□□ -1.48
HTTP42858 AC021106.1-201ENST00000509020 1058 ntBASIC5.83□□□□□ -1.48
HTTP42858 AC013731.1-201ENST00000604340 883 ntBASIC5.83□□□□□ -1.48
HTTP42858 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HTTP42858 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HTTP42858 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
HTTP42858 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HTTP42858 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HTTP42858 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.83□□□□□ -1.48
HTTP42858 RPL12P17-201ENST00000432393 498 ntBASIC5.83□□□□□ -1.48
HTTP42858 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.83□□□□□ -1.48
HTTP42858 RPL7P32-201ENST00000457119 744 ntBASIC5.83□□□□□ -1.48
HTTP42858 ATP5LP5-201ENST00000483050 299 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms