Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 U3.28-201ENST00000391249 210 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 OR7E101P-201ENST00000400428 513 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 RPS6P23-201ENST00000413224 722 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 RIMKLBP2-201ENST00000424737 654 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.74□□□□□ -1.49
FDFT1P37268 AL359265.1-201ENST00000440296 795 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 AL359839.1-201ENST00000451975 1160 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 YRDCP3-201ENST00000456507 480 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 ACA64.1-201ENST00000459171 127 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 RN7SL188P-201ENST00000469842 285 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 RPS3AP15-201ENST00000483874 781 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 EIF4E2P2-201ENST00000492033 736 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 DUTP7-201ENST00000507982 486 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.74□□□□□ -1.49
FDFT1P37268 OR5AM1P-201ENST00000532136 1032 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 OR4A43P-201ENST00000532938 908 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.74□□□□□ -1.49
FDFT1P37268 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.74□□□□□ -1.49
FDFT1P37268 HMGN2P47-201ENST00000559378 272 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 AC105036.1-201ENST00000566222 271 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 AC007066.2-202ENST00000566531 914 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.74□□□□□ -1.49
FDFT1P37268 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.74□□□□□ -1.49
FDFT1P37268 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.74□□□□□ -1.49
FDFT1P37268 AC021766.1-201ENST00000624404 741 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
FDFT1P37268 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
FDFT1P37268 OR8G3P-202ENST00000641572 1255 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.74□□□□□ -1.49
FDFT1P37268 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
FDFT1P37268 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
FDFT1P37268 AP001029.2-203ENST00000589795 4910 ntBASIC5.74□□□□□ -1.49
FDFT1P37268 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
FDFT1P37268 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
FDFT1P37268 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 MAPK10-338ENST00000641647 3362 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 TET1P1-201ENST00000426627 2301 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
FDFT1P37268 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.73□□□□□ -1.49
FDFT1P37268 AL133482.1-201ENST00000415988 498 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 BX323845.3-201ENST00000428215 527 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.73□□□□□ -1.49
FDFT1P37268 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 IGLV3-24-201ENST00000517477 197 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.73□□□□□ -1.49
FDFT1P37268 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.73□□□□□ -1.49
FDFT1P37268 HSPE1P2-201ENST00000554777 306 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.73□□□□□ -1.49
FDFT1P37268 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 RPL12P48-201ENST00000605620 304 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 MIR7109-201ENST00000613748 65 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 AL596275.2-207ENST00000641188 675 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
FDFT1P37268 AC006206.1-201ENST00000544842 3387 ntBASIC5.73□□□□□ -1.49
FDFT1P37268 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
FDFT1P37268 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.73□□□□□ -1.49
FDFT1P37268 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
FDFT1P37268 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.72□□□□□ -1.49
FDFT1P37268 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
FDFT1P37268 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.72□□□□□ -1.49
FDFT1P37268 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FDFT1P37268 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FDFT1P37268 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 AC079097.1-201ENST00000512187 1399 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
FDFT1P37268 MAPK10-328ENST00000641553 4009 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 GAPDHP24-201ENST00000328713 983 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 SNORA70.6-201ENST00000383934 134 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 AL009179.1-201ENST00000406085 265 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 AC079809.1-201ENST00000415468 276 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.72□□□□□ -1.49
FDFT1P37268 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.72□□□□□ -1.49
FDFT1P37268 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.72□□□□□ -1.49
FDFT1P37268 IGBP1P3-201ENST00000447449 1000 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.72□□□□□ -1.49
FDFT1P37268 RPSAP51-201ENST00000497462 645 ntBASIC5.72□□□□□ -1.49
FDFT1P37268 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.72□□□□□ -1.49
FDFT1P37268 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms