Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SCN4AP35499 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCN4AP35499 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCN4AP35499 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCN4AP35499 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCN4AP35499 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SCN4AP35499 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 NLRP3P1-201ENST00000622303 1785 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN4AP35499 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SCN4AP35499 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 USP9YP3-201ENST00000434481 1766 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SCN4AP35499 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.61□□□□□ -1.35
SCN4AP35499 SNORA51.8-201ENST00000384234 132 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 CHMP1B2P-201ENST00000399581 597 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN4AP35499 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 AC007161.1-204ENST00000423039 460 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.61□□□□□ -1.35
SCN4AP35499 RPL31P44-201ENST00000447680 377 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 RN7SL481P-201ENST00000477764 299 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 AL035690.1-201ENST00000490892 383 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 AC139697.1-201ENST00000548429 745 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
SCN4AP35499 ATP5J2P6-201ENST00000565203 266 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.61□□□□□ -1.35
SCN4AP35499 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.61□□□□□ -1.35
SCN4AP35499 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN4AP35499 AC112694.2-201ENST00000623697 768 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SCN4AP35499 AC104581.5-201ENST00000624171 7141 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN4AP35499 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 AC018809.2-201ENST00000602436 3823 ntBASIC6.61□□□□□ -1.35
SCN4AP35499 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCN4AP35499 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN4AP35499 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 AL021877.2-201ENST00000624442 10684 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AL669831.5-218ENST00000591702 1873 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SCN4AP35499 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 AL133388.1-201ENST00000404509 287 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.6□□□□□ -1.35
SCN4AP35499 RPS21P8-201ENST00000413365 247 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AL161722.1-201ENST00000446972 1032 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN4AP35499 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN4AP35499 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC093799.2-201ENST00000610062 578 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AC073869.10-201ENST00000642016 354 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.6□□□□□ -1.35
SCN4AP35499 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 RNA5SP123-201ENST00000363244 119 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AC068538.1-201ENST00000376856 336 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN4AP35499 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN4AP35499 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC009963.2-201ENST00000453431 138 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 RPS23P2-201ENST00000463671 415 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC134698.5-201ENST00000519444 336 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN4AP35499 MIR4270-201ENST00000581799 70 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 MIR132-201ENST00000591554 101 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AC083809.1-201ENST00000615051 472 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AC090607.5-201ENST00000615692 224 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 AP003789.1-201ENST00000617737 605 ntBASIC6.6□□□□□ -1.35
SCN4AP35499 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SCN4AP35499 AC006213.6-201ENST00000623722 4179 ntBASIC6.59□□□□□ -1.35
SCN4AP35499 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms