Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 BMS1P13-201ENST00000417301 885 ntBASIC4.95□□□□□ -1.62
USF1P22415 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.95□□□□□ -1.62
USF1P22415 CYCSP51-201ENST00000443545 318 ntBASIC4.95□□□□□ -1.62
USF1P22415 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.95□□□□□ -1.62
USF1P22415 AC104164.1-201ENST00000460282 590 ntBASIC4.95□□□□□ -1.62
USF1P22415 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.95□□□□□ -1.62
USF1P22415 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.95□□□□□ -1.62
USF1P22415 AC008945.1-201ENST00000505144 499 ntBASIC4.95□□□□□ -1.62
USF1P22415 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.95□□□□□ -1.62
USF1P22415 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.95□□□□□ -1.62
USF1P22415 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.95□□□□□ -1.62
USF1P22415 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.95□□□□□ -1.62
USF1P22415 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.95□□□□□ -1.62
USF1P22415 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.95□□□□□ -1.62
USF1P22415 AC016180.1-201ENST00000567945 403 ntBASIC4.95□□□□□ -1.62
USF1P22415 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC4.95□□□□□ -1.62
USF1P22415 MIR1273E-201ENST00000581165 102 ntBASIC4.95□□□□□ -1.62
USF1P22415 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.95□□□□□ -1.62
USF1P22415 AC015802.2-201ENST00000589690 189 ntBASIC4.95□□□□□ -1.62
USF1P22415 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.95□□□□□ -1.62
USF1P22415 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.95□□□□□ -1.62
USF1P22415 AL139099.4-201ENST00000614802 114 ntBASIC4.95□□□□□ -1.62
USF1P22415 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.95□□□□□ -1.62
USF1P22415 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.95□□□□□ -1.62
USF1P22415 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
USF1P22415 AC093671.1-201ENST00000624981 2929 ntBASIC4.95□□□□□ -1.62
USF1P22415 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
USF1P22415 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.94□□□□□ -1.62
USF1P22415 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
USF1P22415 GAPDHP24-201ENST00000328713 983 ntBASIC4.94□□□□□ -1.62
USF1P22415 RNA5SP132-201ENST00000364725 118 ntBASIC4.94□□□□□ -1.62
USF1P22415 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
USF1P22415 HMGB1P20-201ENST00000402555 677 ntBASIC4.94□□□□□ -1.62
USF1P22415 MIR1178-201ENST00000408396 91 ntBASIC4.94□□□□□ -1.62
USF1P22415 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.94□□□□□ -1.62
USF1P22415 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
USF1P22415 AL365220.1-201ENST00000432923 399 ntBASIC4.94□□□□□ -1.62
USF1P22415 AL731534.1-201ENST00000434711 269 ntBASIC4.94□□□□□ -1.62
USF1P22415 AL445928.1-201ENST00000435545 222 ntBASIC4.94□□□□□ -1.62
USF1P22415 RPS7P3-201ENST00000443360 580 ntBASIC4.94□□□□□ -1.62
USF1P22415 AL163193.1-201ENST00000444895 788 ntBASIC4.94□□□□□ -1.62
USF1P22415 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.94□□□□□ -1.62
USF1P22415 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.94□□□□□ -1.62
USF1P22415 AC074087.1-201ENST00000512059 724 ntBASIC4.94□□□□□ -1.62
USF1P22415 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.94□□□□□ -1.62
USF1P22415 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.94□□□□□ -1.62
USF1P22415 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 AC090286.3-201ENST00000573133 187 ntBASIC4.94□□□□□ -1.62
USF1P22415 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.94□□□□□ -1.62
USF1P22415 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 SUMO2P15-201ENST00000604285 278 ntBASIC4.94□□□□□ -1.62
USF1P22415 RN7SL544P-201ENST00000617232 284 ntBASIC4.94□□□□□ -1.62
USF1P22415 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.94□□□□□ -1.62
USF1P22415 RN7SL763P-201ENST00000620922 284 ntBASIC4.94□□□□□ -1.62
USF1P22415 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.94□□□□□ -1.62
USF1P22415 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.94□□□□□ -1.62
USF1P22415 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.94□□□□□ -1.62
USF1P22415 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.94□□□□□ -1.62
USF1P22415 Z83820.1-201ENST00000456978 1499 ntBASIC4.94□□□□□ -1.62
USF1P22415 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
USF1P22415 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USF1P22415 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USF1P22415 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USF1P22415 AL121768.1-201ENST00000613917 2544 ntBASIC4.93□□□□□ -1.62
USF1P22415 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
USF1P22415 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USF1P22415 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USF1P22415 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.93□□□□□ -1.62
USF1P22415 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
USF1P22415 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USF1P22415 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
USF1P22415 RNA5SP394-201ENST00000364216 119 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms