Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPL23AP40-201ENST00000487630 390 ntBASIC5.77□□□□□ -1.49
CDH3P22223 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH3P22223 MORF4L2P1-201ENST00000503761 858 ntBASIC5.77□□□□□ -1.49
CDH3P22223 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH3P22223 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH3P22223 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH3P22223 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH3P22223 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH3P22223 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH3P22223 AL136131.3-201ENST00000607600 188 ntBASIC5.77□□□□□ -1.49
CDH3P22223 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH3P22223 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.77□□□□□ -1.49
CDH3P22223 uc_338.26-201ENST00000612659 160 ntBASIC5.77□□□□□ -1.49
CDH3P22223 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDH3P22223 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH3P22223 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH3P22223 OR9K1P-202ENST00000641111 3217 ntBASIC5.77□□□□□ -1.49
CDH3P22223 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH3P22223 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 AC027088.4-201ENST00000611559 1947 ntBASIC5.76□□□□□ -1.49
CDH3P22223 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH3P22223 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 RNA5SP187-201ENST00000384400 119 ntBASIC5.76□□□□□ -1.49
CDH3P22223 RNA5SP122-201ENST00000384457 108 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AL096711.1-201ENST00000404780 554 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AL096800.1-201ENST00000405326 893 ntBASIC5.76□□□□□ -1.49
CDH3P22223 RN7SKP151-201ENST00000410230 316 ntBASIC5.76□□□□□ -1.49
CDH3P22223 RPL35AP3-201ENST00000414680 288 ntBASIC5.76□□□□□ -1.49
CDH3P22223 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 RPS29P14-201ENST00000431518 171 ntBASIC5.76□□□□□ -1.49
CDH3P22223 VN1R110P-201ENST00000438988 971 ntBASIC5.76□□□□□ -1.49
CDH3P22223 BMS1P10-201ENST00000443754 1120 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH3P22223 FCF1P7-201ENST00000451185 558 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC016724.1-201ENST00000453215 421 ntBASIC5.76□□□□□ -1.49
CDH3P22223 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AL133372.1-201ENST00000493565 745 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 AC008629.2-201ENST00000503783 483 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC113398.2-201ENST00000507630 558 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH3P22223 AC020937.1-201ENST00000519677 1013 ntBASIC5.76□□□□□ -1.49
CDH3P22223 IGKV2-4-201ENST00000523070 340 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC025857.1-201ENST00000525252 377 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
CDH3P22223 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH3P22223 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH3P22223 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH3P22223 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH3P22223 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 AC008521.2-201ENST00000591021 259 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC027334.1-201ENST00000603257 310 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC100767.2-201ENST00000604840 693 ntBASIC5.76□□□□□ -1.49
CDH3P22223 OR51C1P-201ENST00000608504 942 ntBASIC5.76□□□□□ -1.49
CDH3P22223 AC107905.1-201ENST00000616204 426 ntBASIC5.76□□□□□ -1.49
CDH3P22223 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH3P22223 AC133552.1-201ENST00000569988 4007 ntBASIC5.76□□□□□ -1.49
CDH3P22223 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH3P22223 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH3P22223 PARP4P2-201ENST00000446672 3326 ntBASIC5.76□□□□□ -1.49
CDH3P22223 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CDH3P22223 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH3P22223 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH3P22223 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH3P22223 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH3P22223 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH3P22223 AC016583.1-201ENST00000624221 2431 ntBASIC5.75□□□□□ -1.49
CDH3P22223 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH3P22223 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH3P22223 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH3P22223 RNU6-249P-201ENST00000363016 102 ntBASIC5.75□□□□□ -1.49
CDH3P22223 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDH3P22223 MIR1203-201ENST00000408812 85 ntBASIC5.75□□□□□ -1.49
CDH3P22223 PTCD2P2-201ENST00000415579 1095 ntBASIC5.75□□□□□ -1.49
CDH3P22223 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH3P22223 AL035660.1-201ENST00000422041 222 ntBASIC5.75□□□□□ -1.49
CDH3P22223 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH3P22223 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH3P22223 GEMIN2P1-201ENST00000454246 752 ntBASIC5.75□□□□□ -1.49
CDH3P22223 MTND3P6-201ENST00000485242 339 ntBASIC5.75□□□□□ -1.49
CDH3P22223 CCDC11P1-201ENST00000503137 1162 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms