Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DPA1P20036 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 MFSD8-239ENST00000641590 2479 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNU1-150P-201ENST00000362491 162 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNA5SP514-201ENST00000363717 111 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNA5SP500-201ENST00000364486 119 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNU6-1320P-201ENST00000390838 107 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNU6-1269P-201ENST00000391139 107 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC066692.1-201ENST00000421721 457 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC126120.1-201ENST00000431082 470 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 HLA-DPA3-207ENST00000454398 229 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 ACA64.1-201ENST00000459171 127 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 snoU13.29-201ENST00000459370 104 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNU6-599P-201ENST00000459383 107 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNU6-1193P-201ENST00000459461 107 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 ST13P12-201ENST00000508958 1094 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC074255.1-201ENST00000511259 501 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 TRIM77BP-201ENST00000524985 1119 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 HMGN2P36-201ENST00000529541 409 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC126615.2-201ENST00000553003 515 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AL358913.1-201ENST00000554342 121 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AL365181.4-201ENST00000609800 547 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNU6-368P-201ENST00000620928 107 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RNU6-538P-201ENST00000622329 107 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 FO681491.1-202ENST00000623392 737 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AP001962.1-201ENST00000624114 559 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 AL022311.1-201ENST00000623726 19416 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 MFSD8-219ENST00000641228 2559 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.85□□□□□ -1.47
HLA-DPA1P20036 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DPA1P20036 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 MIR1203-201ENST00000408812 85 ntBASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AK4P4-201ENST00000419465 646 ntBASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AL035660.1-201ENST00000422041 222 ntBASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AL355994.1-201ENST00000424379 260 ntBASIC5.84□□□□□ -1.47
HLA-DPA1P20036 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 OR7E116P-201ENST00000448529 957 ntBASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms