Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.77□□□□□ -1.17
ERCC3P19447 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 ENSAP3-201ENST00000312710 333 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
ERCC3P19447 RNU6-413P-201ENST00000384115 107 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RNU6-1320P-201ENST00000390838 107 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RNU6-1269P-201ENST00000391139 107 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC7.77□□□□□ -1.17
ERCC3P19447 AL136131.1-201ENST00000406079 803 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.77□□□□□ -1.17
ERCC3P19447 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 Z75741.2-201ENST00000417272 1167 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.77□□□□□ -1.17
ERCC3P19447 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
ERCC3P19447 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 EXTL2P1-201ENST00000446218 416 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RPL31P44-201ENST00000447680 377 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RSL24D1P3-201ENST00000449255 495 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC7.77□□□□□ -1.17
ERCC3P19447 RNU6-599P-201ENST00000459383 107 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RNU6-1193P-201ENST00000459461 107 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 RPS3AP22-201ENST00000488297 769 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RPS10P20-201ENST00000494130 463 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.77□□□□□ -1.17
ERCC3P19447 AC118282.2-201ENST00000508739 374 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 MIR548Y-201ENST00000582739 110 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.77□□□□□ -1.17
ERCC3P19447 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RNU6-368P-201ENST00000620928 107 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 RNU6-538P-201ENST00000622329 107 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 AL157770.1-201ENST00000623049 439 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.77□□□□□ -1.17
ERCC3P19447 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 ZNF658B-201ENST00000602828 3408 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
ERCC3P19447 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
ERCC3P19447 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
ERCC3P19447 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.77□□□□□ -1.17
ERCC3P19447 GTF2H2B-203ENST00000508065 1432 ntBASIC7.77□□□□□ -1.17
ERCC3P19447 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 SNX18P3-202ENST00000565670 1750 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
ERCC3P19447 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.76□□□□□ -1.17
ERCC3P19447 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
ERCC3P19447 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
ERCC3P19447 PPIAP24-201ENST00000328558 471 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 TMSB4XP2-201ENST00000335179 210 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 RNA5SP512-201ENST00000364550 120 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 RNU6-549P-201ENST00000384433 107 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 RN7SKP62-201ENST00000384539 329 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 SKINT1L-201ENST00000401057 817 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.76□□□□□ -1.17
ERCC3P19447 AL359694.1-201ENST00000403247 604 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AL356131.1-201ENST00000405826 414 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 CYCSP17-201ENST00000407870 315 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 MRPS21P5-201ENST00000417885 231 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 GPN3P1-201ENST00000423883 535 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 ZDHHC20P2-201ENST00000424108 429 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC7.76□□□□□ -1.17
ERCC3P19447 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC7.76□□□□□ -1.17
ERCC3P19447 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
ERCC3P19447 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 AL008629.1-201ENST00000438615 184 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AL117351.1-201ENST00000438864 766 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 RPL12P11-201ENST00000439970 501 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AC002542.1-201ENST00000440683 193 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 FGF7P5-201ENST00000441829 291 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 AC104978.1-201ENST00000449387 391 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.76□□□□□ -1.17
ERCC3P19447 CDC42P1-201ENST00000456658 548 ntBASIC7.76□□□□□ -1.17
ERCC3P19447 RPL7P48-201ENST00000461513 746 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms