Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.74□□□□□ -1.49
HMGA1P17096 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.74□□□□□ -1.49
HMGA1P17096 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGA1P17096 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.74□□□□□ -1.49
HMGA1P17096 AC109583.2-201ENST00000617367 129 ntBASIC5.74□□□□□ -1.49
HMGA1P17096 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGA1P17096 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGA1P17096 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGA1P17096 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGA1P17096 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HMGA1P17096 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGA1P17096 AC078880.4-201ENST00000617627 1749 ntBASIC5.74□□□□□ -1.49
HMGA1P17096 AL158152.1-201ENST00000602652 1435 ntBASIC5.74□□□□□ -1.49
HMGA1P17096 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGA1P17096 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGA1P17096 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HMGA1P17096 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGA1P17096 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGA1P17096 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGA1P17096 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGA1P17096 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGA1P17096 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGA1P17096 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
HMGA1P17096 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGA1P17096 AC016769.2-201ENST00000414815 475 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 METTL15P3-201ENST00000415522 1221 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 RPS17P5-201ENST00000498293 408 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 HMGB1P44-201ENST00000508597 572 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGA1P17096 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGA1P17096 OR10G5P-201ENST00000532733 358 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 HAUS8P1-201ENST00000549005 542 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGA1P17096 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGA1P17096 AC044860.2-201ENST00000561005 179 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGA1P17096 AP005403.1-201ENST00000579720 229 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 AC060780.2-201ENST00000589047 198 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 AC018809.2-201ENST00000602436 3823 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGA1P17096 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGA1P17096 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMGA1P17096 OR4F13P-202ENST00000560066 2054 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 AC007938.2-201ENST00000604666 2634 ntBASIC5.73□□□□□ -1.49
HMGA1P17096 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HMGA1P17096 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGA1P17096 UGT2B24P-201ENST00000514441 1597 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGA1P17096 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGA1P17096 SNORA70-201ENST00000384436 135 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 OR4K12P-201ENST00000406538 961 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 AC108075.1-201ENST00000424692 529 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 AC005033.1-201ENST00000428904 813 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGA1P17096 FAR2P1-206ENST00000449736 709 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 AZGP1P2-201ENST00000454506 345 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 RPL32P9-201ENST00000487963 407 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 MTND6P2-201ENST00000512226 524 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGA1P17096 RNU6-941P-201ENST00000516346 108 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGA1P17096 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGA1P17096 OR5AM1P-201ENST00000532136 1032 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 AC122688.1-201ENST00000541494 223 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGA1P17096 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGA1P17096 AC060766.1-201ENST00000590824 627 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGA1P17096 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HMGA1P17096 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 ZNF658B-201ENST00000602828 3408 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGA1P17096 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGA1P17096 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 AC144833.1-201ENST00000567953 4089 ntBASIC5.72□□□□□ -1.49
HMGA1P17096 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGA1P17096 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGA1P17096 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HMGA1P17096 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGA1P17096 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
HMGA1P17096 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.71□□□□□ -1.49
HMGA1P17096 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HMGA1P17096 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGA1P17096 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGA1P17096 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGA1P17096 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
HMGA1P17096 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGA1P17096 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGA1P17096 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGA1P17096 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms