Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
USP35Q9P2H5 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
USP35Q9P2H5 CASC19-228ENST00000641414 1684 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 RNU6-609P-201ENST00000365459 107 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC245060.4-201ENST00000413293 1121 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 MTCYBP29-201ENST00000436327 1006 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC005077.1-201ENST00000449226 375 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 RPL23AP73-201ENST00000492507 471 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 SNORA76.2-201ENST00000517095 137 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 MYL6-213ENST00000549017 502 ntTSL 3 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 AL359704.2-201ENST00000604335 521 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC092953.2-201ENST00000608000 699 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 AL031658.2-201ENST00000616850 651 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 MIR6730-201ENST00000622213 67 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
USP35Q9P2H5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC140479.2-201ENST00000421567 3130 ntBASIC8.37□□□□□ -1.07
USP35Q9P2H5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
USP35Q9P2H5 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
USP35Q9P2H5 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
USP35Q9P2H5 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
USP35Q9P2H5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 OR9K1P-201ENST00000326513 941 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 RN7SKP161-201ENST00000411110 305 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL354890.1-201ENST00000413730 346 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 RPS26P13-201ENST00000419030 330 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL121882.1-201ENST00000422893 417 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC021876.1-201ENST00000425959 359 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL445665.1-202ENST00000452436 324 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC083906.1-201ENST00000509298 406 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 IGLV2-28-201ENST00000520681 304 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC079148.1-201ENST00000565944 819 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC019131.2-201ENST00000609071 870 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL136295.6-201ENST00000610486 658 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AL136228.1-201ENST00000622221 319 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
USP35Q9P2H5 AC106872.5-201ENST00000508856 1416 ntBASIC8.36□□□□□ -1.07
USP35Q9P2H5 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
USP35Q9P2H5 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
USP35Q9P2H5 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USP35Q9P2H5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USP35Q9P2H5 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
USP35Q9P2H5 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
USP35Q9P2H5 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.35□□□□□ -1.07
USP35Q9P2H5 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
USP35Q9P2H5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USP35Q9P2H5 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USP35Q9P2H5 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
USP35Q9P2H5 AC007394.1-201ENST00000421941 531 ntBASIC8.35□□□□□ -1.07
USP35Q9P2H5 SUMO2P3-201ENST00000438311 288 ntBASIC8.35□□□□□ -1.07
USP35Q9P2H5 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
USP35Q9P2H5 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC8.35□□□□□ -1.07
USP35Q9P2H5 AC009963.4-201ENST00000448535 339 ntBASIC8.35□□□□□ -1.07
USP35Q9P2H5 RPS27AP2-201ENST00000457576 465 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms