Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 RN7SKP171-201ENST00000364417 303 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 U3.28-201ENST00000391249 210 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 TCEA1P3-201ENST00000443005 880 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 RPS17P5-201ENST00000498293 408 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 RN7SKP183-201ENST00000517169 324 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC092332.1-201ENST00000563684 829 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC002310.3-201ENST00000569728 723 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC096861.1-201ENST00000616652 240 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC111152.1-202ENST00000635848 339 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 NAMPTP1-201ENST00000440465 2514 ntBASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCNB1IP1Q9NPC3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 MIR1275-201ENST00000408770 80 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 HYALP1-201ENST00000417674 1279 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AL354893.1-201ENST00000433735 348 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AL353662.1-201ENST00000439099 327 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 YRDCP3-201ENST00000456507 480 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC005165.2-201ENST00000466070 380 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC092865.4-201ENST00000477936 615 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC091874.2-201ENST00000505889 720 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC018797.1-201ENST00000510791 255 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AL845552.1-201ENST00000556820 323 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 MIR4701-201ENST00000583094 63 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 Z95327.3-201ENST00000610385 572 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AL512356.3-201ENST00000623005 461 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AL683826.1-201ENST00000624104 627 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 GNL2P1-201ENST00000451274 2190 ntBASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNB1IP1Q9NPC3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 RPSAP65-201ENST00000429660 595 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 AC023141.3-201ENST00000436698 278 ntBASIC5.27□□□□□ -1.57
CCNB1IP1Q9NPC3 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms