Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AL356968.2-201ENST00000412769 1257 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC073909.1-201ENST00000447112 999 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC104164.1-201ENST00000460282 590 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC114982.2-201ENST00000461396 358 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC026348.1-201ENST00000462549 1053 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC074087.1-201ENST00000512059 724 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC016180.1-201ENST00000567945 403 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC027334.1-201ENST00000603257 310 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 RN7SL544P-201ENST00000617232 284 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 RN7SL763P-201ENST00000620922 284 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC069234.4-201ENST00000621276 412 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC114876.1-201ENST00000490962 1366 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 AC123769.1-201ENST00000530992 3192 ntBASIC5.88□□□□□ -1.47
TM9SF3Q9HD45 DNM1P47-203ENST00000571780 12667 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC087516.1-201ENST00000561236 2428 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 SNORA64.1-201ENST00000362600 132 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 NPM1P37-201ENST00000403105 874 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 MRPL53P1-201ENST00000414323 319 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 LRRC37A14P-201ENST00000452297 462 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC138866.2-201ENST00000508650 584 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 CYP4F27P-201ENST00000514557 494 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 OR7E18P-201ENST00000592589 702 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC016252.1-201ENST00000609721 474 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 SDR42E1P1-201ENST00000611327 477 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC087565.3-203ENST00000641018 837 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 Z83820.1-201ENST00000456978 1499 ntBASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TM9SF3Q9HD45 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AL355488.2-201ENST00000609909 2850 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AL121977.1-201ENST00000401636 979 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC009506.2-201ENST00000420635 840 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AL662874.1-201ENST00000426065 230 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC092651.1-201ENST00000426110 312 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 RPL5P2-201ENST00000429598 854 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 AC093166.4-201ENST00000457867 318 ntBASIC5.86□□□□□ -1.47
TM9SF3Q9HD45 RFPL4AP3-201ENST00000515267 345 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms