Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 REG1CP-206ENST00000447469 496 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AL445687.2-201ENST00000458156 728 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AL022319.1-201ENST00000458183 1167 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 RN7SL629P-201ENST00000489622 285 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 ATP5LP3-201ENST00000514223 304 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 OR6M2P-201ENST00000529831 871 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC067805.1-201ENST00000559344 470 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC007225.2-201ENST00000562529 256 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC023389.2-201ENST00000580031 955 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 CASC19-260ENST00000641828 2001 ntBASIC6.14□□□□□ -1.43
EBF3Q9H4W6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
EBF3Q9H4W6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 SFR1P2-201ENST00000421841 730 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 BX510359.3-201ENST00000422168 306 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AL590399.2-201ENST00000427536 309 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 LYPLA1P1-201ENST00000434514 622 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AL445928.1-201ENST00000435545 222 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 RPS7P3-201ENST00000443360 580 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AL022237.1-201ENST00000446663 358 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 RPL23AP60-201ENST00000450011 454 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC104164.1-201ENST00000460282 590 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 CR383656.1-201ENST00000484916 377 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC114322.1-201ENST00000506771 926 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC109481.1-201ENST00000509173 282 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 COL6A4P2-205ENST00000509855 506 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC027308.1-201ENST00000517993 110 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 MIR3176-201ENST00000582210 90 ntBASIC6.13□□□□□ -1.43
EBF3Q9H4W6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.13□□□□□ -1.43
EBF3Q9H4W6 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 HMGB1P20-201ENST00000402555 677 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 AL391361.1-201ENST00000405580 489 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 MRPL53P1-201ENST00000414323 319 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 AC007562.1-201ENST00000421819 517 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 MIPEPP2-201ENST00000422560 1819 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 CCNT2P1-201ENST00000423082 1315 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 AC127526.2-201ENST00000426436 775 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 MTCYBP15-201ENST00000433123 1127 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 AC023274.2-201ENST00000445264 521 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 MTND2P25-201ENST00000449028 610 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.12□□□□□ -1.43
EBF3Q9H4W6 AC112187.1-201ENST00000455837 479 ntBASIC6.12□□□□□ -1.43
EBF3Q9H4W6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms