Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 RNA5SP140-201ENST00000364524 92 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 MRPS6P2-201ENST00000381143 370 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 RN7SKP129-201ENST00000410288 299 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 RANP6-201ENST00000413691 644 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 MTCO2P21-201ENST00000419780 677 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC245291.3-201ENST00000443400 292 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AL451063.1-201ENST00000450164 1133 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 LRRC37A14P-201ENST00000452297 462 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 RPS7P10-201ENST00000464254 603 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC008945.1-201ENST00000505144 499 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC021106.1-201ENST00000509020 1058 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AP001207.2-201ENST00000519490 539 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 UBTFL10-201ENST00000528532 562 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC091515.1-201ENST00000548110 679 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 MRPS36P5-201ENST00000551909 298 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC121758.1-202ENST00000556917 658 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC005726.4-201ENST00000582858 458 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 RPL29P33-201ENST00000587474 316 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 BNIP3P24-201ENST00000593398 557 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AL160237.3-201ENST00000604114 1013 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AL365400.2-201ENST00000605604 902 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC093388.1-201ENST00000609166 430 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 MIR6085-201ENST00000618314 110 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 MIR7854-201ENST00000620068 65 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AL591926.1-201ENST00000620542 217 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC010132.4-201ENST00000569883 1368 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 OFD1P17-201ENST00000437639 3018 ntBASIC5.88□□□□□ -1.47
AMBRA1Q9C0C7 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 RNA5SP308-201ENST00000362532 115 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 RPL12P23-201ENST00000405880 490 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC016769.2-201ENST00000414815 475 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC005005.2-201ENST00000420779 380 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 BX119321.1-201ENST00000428912 797 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AL389925.1-201ENST00000432257 728 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AC046176.1-201ENST00000435260 1170 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 MTCO1P53-201ENST00000441633 699 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 RPL6P5-201ENST00000445678 828 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AL157884.3-201ENST00000448273 1184 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 CCRL1P1-201ENST00000449542 1053 ntBASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.87□□□□□ -1.47
AMBRA1Q9C0C7 AKR1D1P1-201ENST00000457236 936 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms