Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.14□□□□□ -1.75
LITAFQ99732 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 RNA5SP321-201ENST00000362722 111 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.14□□□□□ -1.75
LITAFQ99732 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.14□□□□□ -1.75
LITAFQ99732 PEX12P1-201ENST00000400284 1048 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 AL021331.1-201ENST00000402817 582 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 RPL7P27-201ENST00000403775 720 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 TYMSP1-201ENST00000407851 869 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 UBE2V1P11-201ENST00000411559 285 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC4.14□□□□□ -1.75
LITAFQ99732 IFNA12P-201ENST00000413147 571 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 METTL15P3-201ENST00000415522 1221 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.14□□□□□ -1.75
LITAFQ99732 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC138761.5-201ENST00000433967 325 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 GAPDHP33-201ENST00000443168 1013 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC4.14□□□□□ -1.75
LITAFQ99732 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 RN7SL508P-201ENST00000464472 303 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 PSMA2P2-201ENST00000504319 686 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC118465.1-201ENST00000513820 1271 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 RN7SKP141-201ENST00000516167 338 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 OR8I1P-201ENST00000529291 931 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 AP001804.2-201ENST00000533932 910 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 MTND4P33-201ENST00000556706 766 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 ZNF322P1-201ENST00000568013 1209 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC007346.1-201ENST00000569208 867 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC4.14□□□□□ -1.75
LITAFQ99732 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 RN7SL192P-201ENST00000584303 299 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.14□□□□□ -1.75
LITAFQ99732 AC091133.5-201ENST00000603088 301 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC002069.2-201ENST00000603580 883 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC080013.6-201ENST00000606185 215 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.14□□□□□ -1.75
LITAFQ99732 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC096708.4-201ENST00000620563 552 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 RPL23AP61-201ENST00000623642 466 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AC090897.3-201ENST00000636973 1157 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 DMD-205ENST00000359836 7339 ntTSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 MTCO1P28-201ENST00000574177 1528 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.14□□□□□ -1.75
LITAFQ99732 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 AC112255.1-201ENST00000624070 2493 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 AP005435.3-201ENST00000531260 3198 ntBASIC4.14□□□□□ -1.75
LITAFQ99732 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LITAFQ99732 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LITAFQ99732 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC4.13□□□□□ -1.75
LITAFQ99732 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC4.13□□□□□ -1.75
LITAFQ99732 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.13□□□□□ -1.75
LITAFQ99732 AL158152.1-201ENST00000602652 1435 ntBASIC4.13□□□□□ -1.75
LITAFQ99732 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LITAFQ99732 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.13□□□□□ -1.75
LITAFQ99732 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LITAFQ99732 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LITAFQ99732 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LITAFQ99732 AL359091.1-201ENST00000449048 1734 ntBASIC4.13□□□□□ -1.75
LITAFQ99732 AC011416.1-201ENST00000514947 1732 ntBASIC4.13□□□□□ -1.75
LITAFQ99732 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LITAFQ99732 SLC25A51-201ENST00000242275 1130 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LITAFQ99732 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LITAFQ99732 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LITAFQ99732 RNU4-68P-201ENST00000364314 141 ntBASIC4.13□□□□□ -1.75
LITAFQ99732 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.13□□□□□ -1.75
LITAFQ99732 AC074375.1-201ENST00000372993 192 ntBASIC4.13□□□□□ -1.75
LITAFQ99732 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms