Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CDK5RAP1Q96SZ6 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC005261.2-201ENST00000593427 4258 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 CR383656.5-201ENST00000547616 1340 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 Y_RNA.169-201ENST00000363745 96 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 RNU6-1257P-201ENST00000384625 110 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AL049545.1-201ENST00000401856 572 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 GCNT1P4-201ENST00000404096 329 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 Y_RNA.604-201ENST00000410574 102 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 RNU6-564P-201ENST00000410983 104 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 CYP4F30P-202ENST00000420048 405 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 MTND4LP11-201ENST00000422184 280 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AL451136.1-201ENST00000435399 325 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 MTCO2P7-201ENST00000446518 666 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC097463.1-201ENST00000447288 481 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 RPL37P23-201ENST00000492641 294 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 RNA5SP400-201ENST00000517155 111 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC090666.1-201ENST00000578241 445 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 MIR4701-201ENST00000583094 63 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 DEFB131E-202ENST00000602581 683 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC113368.1-201ENST00000603736 382 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AP000864.1-201ENST00000609424 650 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC119674.1-213ENST00000641177 1386 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC027575.3-201ENST00000583058 2747 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC104966.1-201ENST00000467010 1464 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 AC024651.2-201ENST00000562480 2098 ntBASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
CDK5RAP1Q96SZ6 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.52□□□□□ -1.36
CDK5RAP1Q96SZ6 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.52□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.52□□□□□ -1.36
CDK5RAP1Q96SZ6 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 OR56A4-201ENST00000330728 1209 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RNU1-49P-201ENST00000363468 159 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AL445238.1-204ENST00000400311 463 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 FABP12P1-201ENST00000401911 322 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AL356057.1-202ENST00000402263 756 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 NPM1P38-201ENST00000403835 865 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RNA5SP431-201ENST00000410312 120 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 Y_RNA.619-201ENST00000410951 90 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RN7SKP108-201ENST00000411367 328 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 VN1R51P-201ENST00000411675 945 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RCC2P2-201ENST00000422174 918 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AL121882.1-201ENST00000422893 417 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 RPS7P14-201ENST00000426405 583 ntBASIC6.52□□□□□ -1.37
CDK5RAP1Q96SZ6 AC007679.3-201ENST00000434035 414 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms