Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ISCA1P2-201ENST00000438679 421 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC016772.1-201ENST00000444170 1261 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 MTCO2P25-201ENST00000447065 681 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 HMGB1P16-201ENST00000447155 540 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 MTND2P19-201ENST00000449129 1012 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 RPL21P134-201ENST00000453468 483 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 GAPDHP39-201ENST00000481866 979 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC117395.1-201ENST00000487390 403 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC122718.2-201ENST00000505325 591 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 OR9L1P-201ENST00000529493 933 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC092747.2-201ENST00000545069 983 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AL391156.1-201ENST00000554965 554 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC013283.1-201ENST00000557282 492 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC095055.1-201ENST00000603472 1113 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AL590032.1-201ENST00000604920 252 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC026367.2-201ENST00000610630 553 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC006328.2-201ENST00000623198 397 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC012005.2-201ENST00000624333 397 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC007993.1-201ENST00000621298 2430 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 ZNF542P-204ENST00000482727 1305 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 CASC19-260ENST00000641828 2001 ntBASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NPAS4Q8IUM7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC026464.2-201ENST00000567834 2421 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 HMGB1P5-201ENST00000255320 642 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 RSL24D1P4-201ENST00000400938 484 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 MTND4LP11-201ENST00000422184 280 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL590128.1-201ENST00000433407 286 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 SNRPBP1-201ENST00000443634 282 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 BMI1P1-201ENST00000445879 941 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC073387.1-201ENST00000453261 709 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 BX248409.1-201ENST00000455497 255 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 GLRXP3-201ENST00000470810 321 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC037198.2-201ENST00000478845 733 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC090114.3-201ENST00000479267 829 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 WBP1LP4-201ENST00000505043 344 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 SNX18P23-201ENST00000510867 677 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC109445.1-201ENST00000512356 383 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AC093816.1-201ENST00000515076 913 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 MTND4LP18-201ENST00000526864 291 ntBASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.43□□□□□ -1.22
NPAS4Q8IUM7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms