Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ACOT11-202ENST00000371316 6369 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 RNA5SP44-201ENST00000410446 133 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 USP24P1-201ENST00000433802 779 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 MED28P3-201ENST00000444288 531 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC091180.1-201ENST00000462104 372 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 RPS7P6-201ENST00000485777 579 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AP001029.2-203ENST00000589795 4910 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 EI24P4-201ENST00000423683 1078 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC011005.3-201ENST00000491624 395 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AP001880.2-201ENST00000538233 448 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 BNIP3P33-201ENST00000598912 569 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC073869.8-201ENST00000641806 335 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 PCDH11Y-202ENST00000333703 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC092821.2-201ENST00000545710 2042 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 RNA5SP113-201ENST00000410486 84 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AL356390.1-201ENST00000455684 397 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 EDDM3DP-201ENST00000554692 434 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC068831.4-201ENST00000556118 109 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC006115.2-201ENST00000596823 202 ntBASIC4.36□□□□□ -1.71
VPS13CQ709C8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS13CQ709C8 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS13CQ709C8 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 SNORA11.2-201ENST00000408318 127 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC096921.1-201ENST00000411661 375 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC021106.1-201ENST00000509020 1058 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC067852.5-201ENST00000589299 310 ntBASIC4.35□□□□□ -1.71
VPS13CQ709C8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VPS13CQ709C8 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS13CQ709C8 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms