Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 DDX18P5-201ENST00000534547 1306 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC104446.1-201ENST00000613728 1321 ntBASIC6.5□□□□□ -1.37
GABREP78334 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 AC011503.2-201ENST00000594230 1500 ntBASIC6.5□□□□□ -1.37
GABREP78334 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
GABREP78334 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.5□□□□□ -1.37
GABREP78334 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.5□□□□□ -1.37
GABREP78334 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.5□□□□□ -1.37
GABREP78334 ZNF806-201ENST00000438300 1774 ntBASIC6.5□□□□□ -1.37
GABREP78334 SNX18P3-202ENST00000565670 1750 ntBASIC6.5□□□□□ -1.37
GABREP78334 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.5□□□□□ -1.37
GABREP78334 MSL3P1-202ENST00000440028 1468 ntBASIC6.5□□□□□ -1.37
GABREP78334 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GABREP78334 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
GABREP78334 FAM133CP-201ENST00000332869 704 ntBASIC6.5□□□□□ -1.37
GABREP78334 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 RNA5SP435-201ENST00000364044 108 ntBASIC6.5□□□□□ -1.37
GABREP78334 RNU4-7P-201ENST00000364758 141 ntBASIC6.5□□□□□ -1.37
GABREP78334 RNA5SP485-201ENST00000365053 119 ntBASIC6.5□□□□□ -1.37
GABREP78334 RNU1-55P-201ENST00000365510 158 ntBASIC6.5□□□□□ -1.37
GABREP78334 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.5□□□□□ -1.37
GABREP78334 RNU6-413P-201ENST00000384115 107 ntBASIC6.5□□□□□ -1.37
GABREP78334 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.5□□□□□ -1.37
GABREP78334 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.5□□□□□ -1.37
GABREP78334 DPPA2P2-201ENST00000418220 897 ntBASIC6.5□□□□□ -1.37
GABREP78334 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.5□□□□□ -1.37
GABREP78334 GAPDHP57-201ENST00000424400 585 ntBASIC6.5□□□□□ -1.37
GABREP78334 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.5□□□□□ -1.37
GABREP78334 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.5□□□□□ -1.37
GABREP78334 POU5F1P5-201ENST00000445059 658 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC233982.1-201ENST00000451247 436 ntBASIC6.5□□□□□ -1.37
GABREP78334 AURKAPS1-201ENST00000451805 1212 ntBASIC6.5□□□□□ -1.37
GABREP78334 NPM1P13-201ENST00000452663 865 ntBASIC6.5□□□□□ -1.37
GABREP78334 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 AC021205.1-201ENST00000468797 348 ntBASIC6.5□□□□□ -1.37
GABREP78334 RN7SL362P-201ENST00000494228 267 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.5□□□□□ -1.37
GABREP78334 AC091860.1-201ENST00000505723 432 ntBASIC6.5□□□□□ -1.37
GABREP78334 HMGN1P16-201ENST00000508308 283 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC093664.1-201ENST00000511779 289 ntBASIC6.5□□□□□ -1.37
GABREP78334 snoZ278.1-201ENST00000517059 112 ntBASIC6.5□□□□□ -1.37
GABREP78334 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.5□□□□□ -1.37
GABREP78334 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.5□□□□□ -1.37
GABREP78334 OR52K3P-201ENST00000531655 943 ntBASIC6.5□□□□□ -1.37
GABREP78334 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.5□□□□□ -1.37
GABREP78334 AL845552.1-201ENST00000556820 323 ntBASIC6.5□□□□□ -1.37
GABREP78334 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.5□□□□□ -1.37
GABREP78334 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.5□□□□□ -1.37
GABREP78334 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.5□□□□□ -1.37
GABREP78334 AC125494.2-201ENST00000602431 657 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 AL590032.1-201ENST00000604920 252 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC024589.2-201ENST00000605642 1294 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC018638.7-201ENST00000605836 1114 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.5□□□□□ -1.37
GABREP78334 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.5□□□□□ -1.37
GABREP78334 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 AC130448.2-201ENST00000624082 374 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC007490.1-201ENST00000624321 703 ntBASIC6.5□□□□□ -1.37
GABREP78334 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.5□□□□□ -1.37
GABREP78334 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.5□□□□□ -1.37
GABREP78334 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
GABREP78334 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
GABREP78334 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
GABREP78334 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.49□□□□□ -1.37
GABREP78334 AP000547.3-204ENST00000588548 2523 ntBASIC6.49□□□□□ -1.37
GABREP78334 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABREP78334 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.49□□□□□ -1.37
GABREP78334 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.49□□□□□ -1.37
GABREP78334 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABREP78334 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
GABREP78334 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GABREP78334 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
GABREP78334 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
GABREP78334 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
GABREP78334 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABREP78334 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
GABREP78334 BX322650.1-201ENST00000332359 2143 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms