Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNA5SP156-201ENST00000410250 110 ntBASIC4.99□□□□□ -1.61
UBA52P62987 RPS7P8-201ENST00000418311 581 ntBASIC4.99□□□□□ -1.61
UBA52P62987 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.99□□□□□ -1.61
UBA52P62987 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 RPS7P14-201ENST00000426405 583 ntBASIC4.99□□□□□ -1.61
UBA52P62987 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.99□□□□□ -1.61
UBA52P62987 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 RN7SL273P-201ENST00000481561 299 ntBASIC4.99□□□□□ -1.61
UBA52P62987 AC069304.1-201ENST00000491593 704 ntBASIC4.99□□□□□ -1.61
UBA52P62987 RPS4XP14-201ENST00000493072 781 ntBASIC4.99□□□□□ -1.61
UBA52P62987 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 AC114781.3-201ENST00000512083 142 ntBASIC4.99□□□□□ -1.61
UBA52P62987 RPL7L1P4-201ENST00000513004 707 ntBASIC4.99□□□□□ -1.61
UBA52P62987 RNA5SP438-201ENST00000516561 112 ntBASIC4.99□□□□□ -1.61
UBA52P62987 RNA5SP434-201ENST00000516647 121 ntBASIC4.99□□□□□ -1.61
UBA52P62987 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 TPM3P3-201ENST00000521343 354 ntBASIC4.99□□□□□ -1.61
UBA52P62987 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.99□□□□□ -1.61
UBA52P62987 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 AL163952.1-202ENST00000569625 600 ntBASIC4.99□□□□□ -1.61
UBA52P62987 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.99□□□□□ -1.61
UBA52P62987 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.99□□□□□ -1.61
UBA52P62987 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.99□□□□□ -1.61
UBA52P62987 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
UBA52P62987 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 AL353729.2-201ENST00000605859 1249 ntBASIC4.99□□□□□ -1.61
UBA52P62987 AC018690.1-201ENST00000608144 626 ntBASIC4.99□□□□□ -1.61
UBA52P62987 AC108673.3-201ENST00000609183 335 ntBASIC4.99□□□□□ -1.61
UBA52P62987 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.99□□□□□ -1.61
UBA52P62987 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
UBA52P62987 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
UBA52P62987 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
UBA52P62987 AL133243.2-201ENST00000610331 1621 ntBASIC4.98□□□□□ -1.61
UBA52P62987 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.98□□□□□ -1.61
UBA52P62987 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.98□□□□□ -1.61
UBA52P62987 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.98□□□□□ -1.61
UBA52P62987 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 EEF1B2P8-201ENST00000414101 671 ntBASIC4.98□□□□□ -1.61
UBA52P62987 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.98□□□□□ -1.61
UBA52P62987 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.98□□□□□ -1.61
UBA52P62987 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 AC016908.1-201ENST00000442571 1219 ntBASIC4.98□□□□□ -1.61
UBA52P62987 TCEA1P3-201ENST00000443005 880 ntBASIC4.98□□□□□ -1.61
UBA52P62987 CUBNP2-201ENST00000443534 1139 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.98□□□□□ -1.61
UBA52P62987 RPL12P39-201ENST00000455456 496 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC023424.1-201ENST00000496058 459 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC010343.2-201ENST00000510162 224 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.98□□□□□ -1.61
UBA52P62987 SCARNA18.1-201ENST00000516330 83 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC027308.1-201ENST00000517993 110 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.98□□□□□ -1.61
UBA52P62987 AC027544.3-201ENST00000535082 757 ntBASIC4.98□□□□□ -1.61
UBA52P62987 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.98□□□□□ -1.61
UBA52P62987 AC090022.1-201ENST00000546569 311 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.98□□□□□ -1.61
UBA52P62987 AC079600.1-201ENST00000550326 297 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.98□□□□□ -1.61
UBA52P62987 AC126615.2-201ENST00000553003 515 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.98□□□□□ -1.61
UBA52P62987 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.98□□□□□ -1.61
UBA52P62987 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.98□□□□□ -1.61
UBA52P62987 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.98□□□□□ -1.61
UBA52P62987 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.98□□□□□ -1.61
UBA52P62987 AL133481.2-203ENST00000607558 139 ntBASIC4.98□□□□□ -1.61
UBA52P62987 MIR6826-201ENST00000617808 98 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC020763.5-201ENST00000623298 430 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AC073488.3-201ENST00000631611 778 ntBASIC4.98□□□□□ -1.61
UBA52P62987 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.98□□□□□ -1.61
UBA52P62987 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.98□□□□□ -1.61
UBA52P62987 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 RNF19BPY-201ENST00000458209 1550 ntBASIC4.98□□□□□ -1.61
UBA52P62987 MRRFP1-201ENST00000435941 1675 ntBASIC4.98□□□□□ -1.61
UBA52P62987 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
UBA52P62987 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms