Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL627224.1-201ENST00000448334 444 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RHBDL3P58872 COL6A4P2-205ENST00000509855 506 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 ASNSP4-201ENST00000511103 447 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 GAPDHP71-201ENST00000511530 1003 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 RNA5SP362-201ENST00000516048 118 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC022404.1-201ENST00000555320 273 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AP003499.2-201ENST00000624100 483 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AL049767.1-202ENST00000637826 242 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC073869.7-201ENST00000640874 297 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 SHQ1P1-201ENST00000437111 1544 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.04□□□□□ -1.28
RHBDL3P58872 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC008957.3-201ENST00000624112 2242 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 AC010401.2-201ENST00000575137 4934 ntBASIC7.04□□□□□ -1.28
RHBDL3P58872 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
RHBDL3P58872 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
RHBDL3P58872 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RHBDL3P58872 AC093297.3-201ENST00000607056 2517 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AL121768.1-201ENST00000613917 2544 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RHBDL3P58872 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RHBDL3P58872 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 MYL6P5-201ENST00000412707 459 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AL353626.3-201ENST00000413399 657 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 Z68694.1-201ENST00000413929 841 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 BMS1P17-202ENST00000416720 316 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AL513325.1-201ENST00000417716 1034 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AK4P4-201ENST00000419465 646 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 RPL34P3-201ENST00000421454 338 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AC079922.1-201ENST00000443291 359 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AC138866.2-201ENST00000508650 584 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AC074087.1-201ENST00000512059 724 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.03□□□□□ -1.28
RHBDL3P58872 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.03□□□□□ -1.28
RHBDL3P58872 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
RHBDL3P58872 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AC090022.1-201ENST00000546569 311 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.03□□□□□ -1.28
RHBDL3P58872 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 AC004241.3-201ENST00000611728 517 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AL139099.4-201ENST00000614802 114 ntBASIC7.03□□□□□ -1.28
RHBDL3P58872 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.03□□□□□ -1.28
RHBDL3P58872 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
RHBDL3P58872 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.03□□□□□ -1.28
RHBDL3P58872 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RHBDL3P58872 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
RHBDL3P58872 DDX6P1-205ENST00000441966 1436 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 RNA5SP514-201ENST00000363717 111 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 RNU4-7P-201ENST00000364758 141 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.02□□□□□ -1.29
RHBDL3P58872 CCNB2P1-201ENST00000399411 1150 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 AL034403.1-201ENST00000399414 885 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.02□□□□□ -1.29
RHBDL3P58872 AC015977.1-201ENST00000418887 292 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.02□□□□□ -1.29
RHBDL3P58872 FAR1P1-201ENST00000427163 934 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.02□□□□□ -1.29
RHBDL3P58872 MTCYBP29-201ENST00000436327 1006 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC7.02□□□□□ -1.29
RHBDL3P58872 RPS15AP29-201ENST00000445539 400 ntBASIC7.02□□□□□ -1.29
RHBDL3P58872 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms