Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH13P55290 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 RN7SKP279-201ENST00000411383 298 ntBASIC5.65□□□□□ -1.5
CDH13P55290 AL354890.1-201ENST00000413730 346 ntBASIC5.65□□□□□ -1.5
CDH13P55290 MTCO1P51-201ENST00000427672 1060 ntBASIC5.65□□□□□ -1.5
CDH13P55290 RPL5P7-201ENST00000444235 813 ntBASIC5.65□□□□□ -1.5
CDH13P55290 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH13P55290 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH13P55290 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH13P55290 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH13P55290 AC098847.1-201ENST00000473094 348 ntBASIC5.65□□□□□ -1.5
CDH13P55290 AC092865.4-201ENST00000477936 615 ntBASIC5.65□□□□□ -1.5
CDH13P55290 RN7SL568P-201ENST00000493069 298 ntBASIC5.65□□□□□ -1.5
CDH13P55290 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 AC105384.2-201ENST00000508433 640 ntBASIC5.65□□□□□ -1.5
CDH13P55290 RNU6-319P-201ENST00000516025 108 ntBASIC5.65□□□□□ -1.5
CDH13P55290 RN7SKP238-201ENST00000516483 249 ntBASIC5.65□□□□□ -1.5
CDH13P55290 SEC11B-201ENST00000518383 499 ntBASIC5.65□□□□□ -1.5
CDH13P55290 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH13P55290 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH13P55290 AP003033.2-201ENST00000528901 805 ntBASIC5.65□□□□□ -1.5
CDH13P55290 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH13P55290 SNRPGP1-201ENST00000553864 222 ntBASIC5.65□□□□□ -1.5
CDH13P55290 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH13P55290 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH13P55290 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH13P55290 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH13P55290 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH13P55290 AC124916.2-201ENST00000604416 224 ntBASIC5.65□□□□□ -1.5
CDH13P55290 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH13P55290 MIR6809-201ENST00000612189 116 ntBASIC5.65□□□□□ -1.5
CDH13P55290 AL139099.4-201ENST00000614802 114 ntBASIC5.65□□□□□ -1.5
CDH13P55290 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 HSPD1P9-201ENST00000420325 1636 ntBASIC5.65□□□□□ -1.51
CDH13P55290 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.65□□□□□ -1.51
CDH13P55290 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH13P55290 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CDH13P55290 SSXP3-201ENST00000442971 1300 ntBASIC5.65□□□□□ -1.51
CDH13P55290 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.65□□□□□ -1.51
CDH13P55290 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CDH13P55290 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH13P55290 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDH13P55290 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH13P55290 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.65□□□□□ -1.51
CDH13P55290 OR51C1P-202ENST00000641159 1444 ntBASIC5.65□□□□□ -1.51
CDH13P55290 BCORP1-203ENST00000513194 5093 ntBASIC5.65□□□□□ -1.51
CDH13P55290 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH13P55290 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH13P55290 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH13P55290 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 GAPDHP48-201ENST00000436626 961 ntBASIC5.64□□□□□ -1.51
CDH13P55290 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 AC097463.1-201ENST00000447288 481 ntBASIC5.64□□□□□ -1.51
CDH13P55290 RPS23P9-201ENST00000448848 438 ntBASIC5.64□□□□□ -1.51
CDH13P55290 AC005077.1-201ENST00000449226 375 ntBASIC5.64□□□□□ -1.51
CDH13P55290 AC090602.1-201ENST00000469695 252 ntBASIC5.64□□□□□ -1.51
CDH13P55290 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 AC105918.1-201ENST00000474399 838 ntBASIC5.64□□□□□ -1.51
CDH13P55290 AC025181.1-201ENST00000477507 416 ntBASIC5.64□□□□□ -1.51
CDH13P55290 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH13P55290 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH13P55290 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH13P55290 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 AC091078.2-201ENST00000557145 559 ntBASIC5.64□□□□□ -1.51
CDH13P55290 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH13P55290 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 ARGFXP2-201ENST00000579304 949 ntBASIC5.64□□□□□ -1.51
CDH13P55290 MIR4502-201ENST00000580432 81 ntBASIC5.64□□□□□ -1.51
CDH13P55290 AC005244.1-201ENST00000582566 339 ntBASIC5.64□□□□□ -1.51
CDH13P55290 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 AL035661.1-201ENST00000620459 1144 ntBASIC5.64□□□□□ -1.51
CDH13P55290 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH13P55290 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH13P55290 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms