Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC112184.1-201ENST00000505179 312 ntBASIC6.04□□□□□ -1.44
LHX1P48742 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.04□□□□□ -1.44
LHX1P48742 HSPE1P2-201ENST00000554777 306 ntBASIC6.04□□□□□ -1.44
LHX1P48742 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.04□□□□□ -1.44
LHX1P48742 RBM22P12-201ENST00000567098 1255 ntBASIC6.04□□□□□ -1.44
LHX1P48742 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.04□□□□□ -1.44
LHX1P48742 HIRAP1-201ENST00000605318 787 ntBASIC6.04□□□□□ -1.44
LHX1P48742 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.04□□□□□ -1.44
LHX1P48742 MIR6768-201ENST00000610734 72 ntBASIC6.04□□□□□ -1.44
LHX1P48742 AL035661.1-201ENST00000620459 1144 ntBASIC6.04□□□□□ -1.44
LHX1P48742 AL049767.1-202ENST00000637826 242 ntBASIC6.04□□□□□ -1.44
LHX1P48742 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
LHX1P48742 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
LHX1P48742 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.04□□□□□ -1.44
LHX1P48742 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.04□□□□□ -1.44
LHX1P48742 AC239868.2-201ENST00000564237 4527 ntBASIC6.04□□□□□ -1.44
LHX1P48742 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LHX1P48742 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.04□□□□□ -1.44
LHX1P48742 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.04□□□□□ -1.44
LHX1P48742 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LHX1P48742 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.03□□□□□ -1.44
LHX1P48742 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.03□□□□□ -1.44
LHX1P48742 AL158152.1-201ENST00000602652 1435 ntBASIC6.03□□□□□ -1.44
LHX1P48742 RNA5SP514-201ENST00000363717 111 ntBASIC6.03□□□□□ -1.44
LHX1P48742 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.03□□□□□ -1.44
LHX1P48742 AL391422.1-201ENST00000402155 436 ntBASIC6.03□□□□□ -1.44
LHX1P48742 RPS6P23-201ENST00000413224 722 ntBASIC6.03□□□□□ -1.44
LHX1P48742 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.03□□□□□ -1.44
LHX1P48742 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.03□□□□□ -1.44
LHX1P48742 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.03□□□□□ -1.44
LHX1P48742 RFESDP1-201ENST00000422350 461 ntBASIC6.03□□□□□ -1.44
LHX1P48742 TRGV7-201ENST00000427089 353 ntBASIC6.03□□□□□ -1.44
LHX1P48742 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LHX1P48742 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.03□□□□□ -1.44
LHX1P48742 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LHX1P48742 RPS7P6-201ENST00000485777 579 ntBASIC6.03□□□□□ -1.44
LHX1P48742 PDCL3P4-201ENST00000489621 720 ntBASIC6.03□□□□□ -1.44
LHX1P48742 AP001960.1-201ENST00000506494 658 ntBASIC6.03□□□□□ -1.44
LHX1P48742 RN7SKP67-201ENST00000515905 235 ntBASIC6.03□□□□□ -1.44
LHX1P48742 SNORA81.2-201ENST00000516868 170 ntBASIC6.03□□□□□ -1.44
LHX1P48742 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.03□□□□□ -1.44
LHX1P48742 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.03□□□□□ -1.44
LHX1P48742 NPM1P42-201ENST00000560329 862 ntBASIC6.03□□□□□ -1.44
LHX1P48742 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.03□□□□□ -1.44
LHX1P48742 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.03□□□□□ -1.44
LHX1P48742 MIR4311-201ENST00000580794 100 ntBASIC6.03□□□□□ -1.44
LHX1P48742 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.03□□□□□ -1.44
LHX1P48742 MIR1273E-201ENST00000581165 102 ntBASIC6.03□□□□□ -1.44
LHX1P48742 AC005899.7-201ENST00000618199 588 ntBASIC6.03□□□□□ -1.44
LHX1P48742 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LHX1P48742 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LHX1P48742 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LHX1P48742 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LHX1P48742 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LHX1P48742 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LHX1P48742 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.03□□□□□ -1.44
LHX1P48742 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
LHX1P48742 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.02□□□□□ -1.45
LHX1P48742 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
LHX1P48742 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
LHX1P48742 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.02□□□□□ -1.45
LHX1P48742 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.02□□□□□ -1.45
LHX1P48742 RNF10P1-201ENST00000418589 369 ntBASIC6.02□□□□□ -1.45
LHX1P48742 AL133173.1-201ENST00000423458 397 ntBASIC6.02□□□□□ -1.45
LHX1P48742 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.02□□□□□ -1.45
LHX1P48742 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.02□□□□□ -1.45
LHX1P48742 AL450023.1-201ENST00000450868 751 ntBASIC6.02□□□□□ -1.45
LHX1P48742 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.02□□□□□ -1.45
LHX1P48742 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.02□□□□□ -1.45
LHX1P48742 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.02□□□□□ -1.45
LHX1P48742 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.02□□□□□ -1.45
LHX1P48742 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 AC139697.1-201ENST00000548429 745 ntBASIC6.02□□□□□ -1.45
LHX1P48742 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.02□□□□□ -1.45
LHX1P48742 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.02□□□□□ -1.45
LHX1P48742 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.02□□□□□ -1.45
LHX1P48742 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.02□□□□□ -1.45
LHX1P48742 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.02□□□□□ -1.45
LHX1P48742 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.02□□□□□ -1.45
LHX1P48742 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.02□□□□□ -1.45
LHX1P48742 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LHX1P48742 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.02□□□□□ -1.45
LHX1P48742 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
LHX1P48742 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LHX1P48742 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.01□□□□□ -1.45
LHX1P48742 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
LHX1P48742 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.01□□□□□ -1.45
LHX1P48742 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms