Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC007679.3-201ENST00000434035 414 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC110602.1-201ENST00000437414 318 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HNF4AP41235 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.75□□□□□ -1.49
HNF4AP41235 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC097463.1-201ENST00000447288 481 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 OSTCP1-201ENST00000455507 450 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AL603882.1-201ENST00000463059 681 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC023245.1-201ENST00000468501 517 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 PFN1P6-201ENST00000476786 399 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC079080.1-201ENST00000479841 822 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.75□□□□□ -1.49
HNF4AP41235 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.75□□□□□ -1.49
HNF4AP41235 RPS27AP18-201ENST00000515536 459 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 IGKV3D-25-201ENST00000519599 235 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HNF4AP41235 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.75□□□□□ -1.49
HNF4AP41235 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.75□□□□□ -1.49
HNF4AP41235 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.75□□□□□ -1.49
HNF4AP41235 AL163952.1-202ENST00000569625 600 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.75□□□□□ -1.49
HNF4AP41235 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.75□□□□□ -1.49
HNF4AP41235 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC092266.1-201ENST00000610958 165 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC107308.1-201ENST00000615897 301 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AL445670.1-201ENST00000618889 801 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC096708.4-201ENST00000620563 552 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC015722.2-201ENST00000622210 551 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 SNX18P12-201ENST00000624821 759 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
HNF4AP41235 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.75□□□□□ -1.49
HNF4AP41235 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HNF4AP41235 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AC012254.3-201ENST00000591183 2117 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HNF4AP41235 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HNF4AP41235 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HNF4AP41235 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HNF4AP41235 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.75□□□□□ -1.49
HNF4AP41235 AC093775.1-201ENST00000624154 1868 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HNF4AP41235 AC093671.1-201ENST00000624981 2929 ntBASIC5.75□□□□□ -1.49
HNF4AP41235 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 IFIT1P1-201ENST00000400497 1449 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
HNF4AP41235 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HNF4AP41235 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.74□□□□□ -1.49
HNF4AP41235 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 VN1R12P-201ENST00000403778 876 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.74□□□□□ -1.49
HNF4AP41235 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 AL590399.2-201ENST00000427536 309 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.74□□□□□ -1.49
HNF4AP41235 USP24P1-201ENST00000433802 779 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 RPSAP40-201ENST00000442343 891 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 AL445466.1-201ENST00000448432 357 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.74□□□□□ -1.49
HNF4AP41235 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.74□□□□□ -1.49
HNF4AP41235 AL356390.1-201ENST00000455684 397 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.74□□□□□ -1.49
HNF4AP41235 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 RBBP4P1-201ENST00000502424 1276 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 AC018442.3-201ENST00000523025 183 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.74□□□□□ -1.49
HNF4AP41235 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.74□□□□□ -1.49
HNF4AP41235 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.74□□□□□ -1.49
HNF4AP41235 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 AC026826.3-201ENST00000561747 158 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.74□□□□□ -1.49
HNF4AP41235 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.74□□□□□ -1.49
HNF4AP41235 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.74□□□□□ -1.49
HNF4AP41235 AL021918.2-201ENST00000613415 194 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 AL161756.3-201ENST00000641216 2071 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
HNF4AP41235 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.74□□□□□ -1.49
HNF4AP41235 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HNF4AP41235 CASC19-260ENST00000641828 2001 ntBASIC5.74□□□□□ -1.49
HNF4AP41235 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.73□□□□□ -1.49
HNF4AP41235 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HNF4AP41235 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms