Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 AC091860.1-201ENST00000505723 432 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 AC091849.1-201ENST00000509920 121 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 PRELID3BP4-201ENST00000515476 571 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 MTCO1P47-201ENST00000523889 1271 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.79□□□□□ -1.16
ERCC3P19447 MTND4LP24-201ENST00000572277 291 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 AC091133.5-201ENST00000603088 301 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 AC069304.3-201ENST00000603938 1084 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.79□□□□□ -1.16
ERCC3P19447 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.79□□□□□ -1.16
ERCC3P19447 AC109454.4-201ENST00000623411 649 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 AC111152.1-202ENST00000635848 339 ntBASIC7.79□□□□□ -1.16
ERCC3P19447 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.79□□□□□ -1.16
ERCC3P19447 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
ERCC3P19447 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.79□□□□□ -1.16
ERCC3P19447 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.79□□□□□ -1.16
ERCC3P19447 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
ERCC3P19447 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.78□□□□□ -1.16
ERCC3P19447 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 MAPK10-383ENST00000642032 3390 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 METTL21EP-201ENST00000298105 713 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AL590762.1-201ENST00000391782 432 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 RPS27AP11-201ENST00000402798 447 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.78□□□□□ -1.16
ERCC3P19447 GSTA6P-201ENST00000424144 582 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.78□□□□□ -1.16
ERCC3P19447 AL645939.3-201ENST00000435408 225 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 ART2BP-201ENST00000453501 499 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 NECAP1P2-201ENST00000455668 727 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 CCNJP2-201ENST00000457810 1163 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC7.78□□□□□ -1.16
ERCC3P19447 RPS27P20-201ENST00000492051 246 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 RN7SL187P-201ENST00000495587 303 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.78□□□□□ -1.16
ERCC3P19447 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC7.78□□□□□ -1.16
ERCC3P19447 AC005363.1-201ENST00000530779 351 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.78□□□□□ -1.16
ERCC3P19447 DUXAP6-201ENST00000553858 601 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AC090695.1-201ENST00000561269 1222 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.78□□□□□ -1.16
ERCC3P19447 RN7SL230P-201ENST00000580835 303 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
ERCC3P19447 AP001269.3-201ENST00000588718 329 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 VN1R83P-201ENST00000595685 445 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 AC125494.3-201ENST00000602759 455 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 Z99497.2-201ENST00000603634 310 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AC139493.1-201ENST00000604368 397 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AL392112.1-201ENST00000605115 829 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AC080013.6-201ENST00000606185 215 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 AL356274.1-201ENST00000617064 410 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 AC024595.1-201ENST00000623088 387 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 MIR3974-201ENST00000637126 96 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.78□□□□□ -1.16
ERCC3P19447 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
ERCC3P19447 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.78□□□□□ -1.16
ERCC3P19447 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.78□□□□□ -1.16
ERCC3P19447 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
ERCC3P19447 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.78□□□□□ -1.16
ERCC3P19447 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.77□□□□□ -1.17
ERCC3P19447 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.77□□□□□ -1.17
ERCC3P19447 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms