Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.89□□□□□ -1.31
HLA-DOAP06340 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-DOAP06340 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HLA-DOAP06340 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HLA-DOAP06340 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HLA-DOAP06340 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HLA-DOAP06340 OR51C1P-202ENST00000641159 1444 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HLA-DOAP06340 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 MARK2P12-201ENST00000420129 585 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 MTND2P2-201ENST00000434633 945 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 MAPRE1P3-201ENST00000435438 796 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC005297.1-201ENST00000444765 862 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 RPS15AP29-201ENST00000445539 400 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 RN7SL284P-201ENST00000498823 275 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 MIR2117-201ENST00000516780 80 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC090022.1-201ENST00000546569 311 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC125612.1-201ENST00000547580 377 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 AL049874.4-201ENST00000557593 255 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 DPPA2P4-201ENST00000563717 878 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 MIR3176-201ENST00000582210 90 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 SNORA35B-201ENST00000607417 129 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC084824.5-201ENST00000612009 413 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 AC091046.2-201ENST00000620775 665 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 CU639417.4-201ENST00000623928 207 ntBASIC6.88□□□□□ -1.31
HLA-DOAP06340 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HLA-DOAP06340 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HLA-DOAP06340 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HLA-DOAP06340 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.88□□□□□ -1.31
HLA-DOAP06340 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 SNORA70H-201ENST00000383910 135 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 SNORA70J-201ENST00000384182 135 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 AL360271.1-201ENST00000395679 510 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 ATP5F1P6-201ENST00000402768 767 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 RMRPP5-201ENST00000411156 267 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 TNPO1P1-201ENST00000423641 1138 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 MTND2P25-201ENST00000449028 610 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 OFD1P3Y-201ENST00000453312 783 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 RPL32P33-201ENST00000487023 394 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 AL035690.1-201ENST00000490892 383 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 AC009120.1-201ENST00000493458 473 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 UBE2V1P12-201ENST00000503954 474 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 AC021678.3-201ENST00000517893 476 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 AL121594.4-201ENST00000556211 1196 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 AC135803.1-201ENST00000608748 565 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 AC008115.3-201ENST00000614874 549 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 AC090772.4-201ENST00000623599 362 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 AC007683.2-201ENST00000624681 714 ntBASIC6.87□□□□□ -1.31
HLA-DOAP06340 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HLA-DOAP06340 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.87□□□□□ -1.31
HLA-DOAP06340 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms