Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 RPL26P30-202ENST00000602923 645 ntBASIC3.33□□□□□ -1.88
APOBP04114 MLECP1-201ENST00000615893 709 ntBASIC3.33□□□□□ -1.88
APOBP04114 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.33□□□□□ -1.88
APOBP04114 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
APOBP04114 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 AC004014.2-201ENST00000623718 5122 ntBASIC3.33□□□□□ -1.88
APOBP04114 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBP04114 AC026402.1-201ENST00000513642 170 ntBASIC3.32□□□□□ -1.88
APOBP04114 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 AC067959.1-201ENST00000604334 379 ntBASIC3.32□□□□□ -1.88
APOBP04114 MIR6716-201ENST00000613413 80 ntBASIC3.32□□□□□ -1.88
APOBP04114 AC091932.2-201ENST00000623014 291 ntBASIC3.32□□□□□ -1.88
APOBP04114 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
APOBP04114 ATG4AP1-201ENST00000416893 538 ntBASIC3.32□□□□□ -1.88
APOBP04114 RPL12P17-201ENST00000432393 498 ntBASIC3.32□□□□□ -1.88
APOBP04114 AL672138.1-201ENST00000450604 1015 ntBASIC3.32□□□□□ -1.88
APOBP04114 AC091180.1-201ENST00000462104 372 ntBASIC3.32□□□□□ -1.88
APOBP04114 CSNK1A1P3-201ENST00000504105 330 ntBASIC3.32□□□□□ -1.88
APOBP04114 OR8G5-201ENST00000524943 1041 ntBASIC3.32□□□□□ -1.88
APOBP04114 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBP04114 AC130448.2-201ENST00000624082 374 ntBASIC3.32□□□□□ -1.88
APOBP04114 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 SELE-204ENST00000367776 3576 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 SELE-205ENST00000367777 3576 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
APOBP04114 SNORA70.4-201ENST00000365509 134 ntBASIC3.32□□□□□ -1.88
APOBP04114 EDDM3DP-201ENST00000554692 434 ntBASIC3.32□□□□□ -1.88
APOBP04114 TVP23CP2-201ENST00000571473 623 ntBASIC3.32□□□□□ -1.88
APOBP04114 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 MIR6830-201ENST00000636015 70 ntBASIC3.32□□□□□ -1.88
APOBP04114 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBP04114 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 AC079741.1-201ENST00000321498 212 ntBASIC3.32□□□□□ -1.88
APOBP04114 RN7SKP263-201ENST00000411194 309 ntBASIC3.32□□□□□ -1.88
APOBP04114 AL353626.3-201ENST00000413399 657 ntBASIC3.32□□□□□ -1.88
APOBP04114 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBP04114 HMGN2P25-201ENST00000486956 268 ntBASIC3.32□□□□□ -1.88
APOBP04114 AC021106.1-201ENST00000509020 1058 ntBASIC3.32□□□□□ -1.88
APOBP04114 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBP04114 MIR4284-201ENST00000578924 81 ntBASIC3.32□□□□□ -1.88
APOBP04114 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 AC099494.2-201ENST00000623371 978 ntBASIC3.32□□□□□ -1.88
APOBP04114 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBP04114 AC139713.2-214ENST00000642059 1811 ntBASIC3.32□□□□□ -1.88
APOBP04114 HSPD1P7-201ENST00000447985 1686 ntBASIC3.32□□□□□ -1.88
APOBP04114 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBP04114 ITPK1-AS1-201ENST00000553639 4701 ntBASIC3.31□□□□□ -1.88
APOBP04114 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms