Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.51□□□□□ -1.53
TNFP01375 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFP01375 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFP01375 FKBP1AP1-201ENST00000594588 318 ntBASIC5.51□□□□□ -1.53
TNFP01375 AC012616.1-201ENST00000600294 197 ntBASIC5.51□□□□□ -1.53
TNFP01375 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.51□□□□□ -1.53
TNFP01375 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.51□□□□□ -1.53
TNFP01375 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 BCORP1-203ENST00000513194 5093 ntBASIC5.51□□□□□ -1.53
TNFP01375 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFP01375 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
TNFP01375 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFP01375 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFP01375 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFP01375 AC011504.1-201ENST00000623331 4103 ntBASIC5.51□□□□□ -1.53
TNFP01375 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFP01375 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TNFP01375 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFP01375 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 AL360270.2-201ENST00000562952 5985 ntBASIC5.5□□□□□ -1.53
TNFP01375 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TNFP01375 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.5□□□□□ -1.53
TNFP01375 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFP01375 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFP01375 RNF10P1-201ENST00000418589 369 ntBASIC5.5□□□□□ -1.53
TNFP01375 RNGTTP1-201ENST00000420965 728 ntBASIC5.5□□□□□ -1.53
TNFP01375 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 AC073410.1-201ENST00000435125 589 ntBASIC5.5□□□□□ -1.53
TNFP01375 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFP01375 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 AC008638.1-201ENST00000506035 866 ntBASIC5.5□□□□□ -1.53
TNFP01375 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFP01375 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 RN7SKP248-201ENST00000516278 305 ntBASIC5.5□□□□□ -1.53
TNFP01375 IGLV3-24-201ENST00000517477 197 ntBASIC5.5□□□□□ -1.53
TNFP01375 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFP01375 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 MIR1269B-201ENST00000580405 75 ntBASIC5.5□□□□□ -1.53
TNFP01375 HIRAP1-201ENST00000605318 787 ntBASIC5.5□□□□□ -1.53
TNFP01375 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFP01375 SDR42E1P1-201ENST00000611327 477 ntBASIC5.5□□□□□ -1.53
TNFP01375 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFP01375 CASC19-264ENST00000641912 1184 ntBASIC5.5□□□□□ -1.53
TNFP01375 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFP01375 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TNFP01375 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TNFP01375 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.5□□□□□ -1.53
TNFP01375 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFP01375 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFP01375 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 AC087516.1-201ENST00000561236 2428 ntBASIC5.49□□□□□ -1.53
TNFP01375 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 AC018809.2-201ENST00000602436 3823 ntBASIC5.49□□□□□ -1.53
TNFP01375 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.49□□□□□ -1.53
TNFP01375 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TNFP01375 OR9K1P-201ENST00000326513 941 ntBASIC5.49□□□□□ -1.53
TNFP01375 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFP01375 MIR1286-201ENST00000408112 78 ntBASIC5.49□□□□□ -1.53
TNFP01375 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.49□□□□□ -1.53
TNFP01375 TMEM183AP1-205ENST00000432739 290 ntBASIC5.49□□□□□ -1.53
TNFP01375 RPL7P45-201ENST00000455851 743 ntBASIC5.49□□□□□ -1.53
TNFP01375 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFP01375 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.49□□□□□ -1.53
TNFP01375 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.49□□□□□ -1.53
TNFP01375 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.49□□□□□ -1.53
TNFP01375 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.49□□□□□ -1.53
TNFP01375 RNA5SP34-201ENST00000516887 130 ntBASIC5.49□□□□□ -1.53
TNFP01375 AC027308.1-201ENST00000517993 110 ntBASIC5.49□□□□□ -1.53
TNFP01375 AC139697.1-201ENST00000548429 745 ntBASIC5.49□□□□□ -1.53
TNFP01375 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.49□□□□□ -1.53
TNFP01375 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms