Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.47□□□□□ -1.53
CLPTM1O96005 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.47□□□□□ -1.53
CLPTM1O96005 NAMPTP1-201ENST00000440465 2514 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.47□□□□□ -1.53
CLPTM1O96005 OR5T3-201ENST00000303059 1023 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLPTM1O96005 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
CLPTM1O96005 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AL359885.1-201ENST00000415786 903 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC234781.4-201ENST00000419384 244 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 CXCR2P1-202ENST00000443392 1074 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 EEF1B2P3-201ENST00000447718 678 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.47□□□□□ -1.53
CLPTM1O96005 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.47□□□□□ -1.53
CLPTM1O96005 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.47□□□□□ -1.53
CLPTM1O96005 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 RNU6-513P-201ENST00000516104 104 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.47□□□□□ -1.53
CLPTM1O96005 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.47□□□□□ -1.53
CLPTM1O96005 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC091167.5-201ENST00000605689 894 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 RN7SL261P-201ENST00000613441 282 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 AP003400.2-201ENST00000624036 666 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 AC103703.1-201ENST00000634783 663 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 CASC19-246ENST00000641625 1606 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLPTM1O96005 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.47□□□□□ -1.53
CLPTM1O96005 TTC39DP-201ENST00000416781 1688 ntBASIC5.47□□□□□ -1.53
CLPTM1O96005 THAP12P5-201ENST00000405864 2275 ntBASIC5.46□□□□□ -1.53
CLPTM1O96005 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
CLPTM1O96005 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CLPTM1O96005 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
CLPTM1O96005 TCP1P3-201ENST00000414406 1498 ntBASIC5.46□□□□□ -1.53
CLPTM1O96005 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CLPTM1O96005 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.53
CLPTM1O96005 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC026523.2-201ENST00000625039 7739 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.46□□□□□ -1.54
CLPTM1O96005 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 MIR188-201ENST00000385034 86 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 AL157702.1-201ENST00000398764 426 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.46□□□□□ -1.54
CLPTM1O96005 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 EMC3-AS1-205ENST00000438698 534 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 GAPDHP23-201ENST00000444823 993 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC007383.1-201ENST00000445875 636 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 OR7E22P-201ENST00000478335 1035 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC112484.3-201ENST00000505910 329 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 RNA5SP206-201ENST00000516703 121 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 RNA5SP441-201ENST00000516809 88 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 IGLV3-24-201ENST00000517477 197 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.46□□□□□ -1.54
CLPTM1O96005 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 OR8A2P-201ENST00000528631 952 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.46□□□□□ -1.54
CLPTM1O96005 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC067805.1-201ENST00000559344 470 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 AC005632.2-201ENST00000564271 828 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 AC106730.2-201ENST00000566641 540 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.46□□□□□ -1.54
CLPTM1O96005 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.46□□□□□ -1.54
CLPTM1O96005 AC005332.4-201ENST00000592752 579 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 BX322635.1-201ENST00000605804 496 ntBASIC5.46□□□□□ -1.54
CLPTM1O96005 AL023583.1-201ENST00000607518 1143 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms