Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.16□□□□□ -1.42
CNOT4O95628 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.16□□□□□ -1.42
CNOT4O95628 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNOT4O95628 AC095050.2-201ENST00000510748 1458 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 AC015871.3-201ENST00000618835 2261 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.15□□□□□ -1.42
CNOT4O95628 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 AC127070.3-201ENST00000503695 3263 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.15□□□□□ -1.42
CNOT4O95628 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 AC007485.2-201ENST00000623493 1667 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CNOT4O95628 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
CNOT4O95628 Y_RNA.77-201ENST00000362962 107 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 RNU5B-1-201ENST00000363286 116 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 RPS3AP26-201ENST00000398259 784 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AL033519.1-201ENST00000407266 307 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 RN7SKP146-201ENST00000410242 334 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 RAD23BP2-201ENST00000416003 1207 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 LINC01881-201ENST00000416103 412 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 OR5BE1P-201ENST00000425977 939 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.15□□□□□ -1.42
CNOT4O95628 C8orf59P1-201ENST00000429930 303 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 BX119904.1-201ENST00000432026 348 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.15□□□□□ -1.42
CNOT4O95628 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.15□□□□□ -1.42
CNOT4O95628 LSM3P3-201ENST00000436601 306 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 MTCO2P16-201ENST00000436962 677 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 ISCA1P2-201ENST00000438679 421 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC234771.4-201ENST00000441416 730 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 MTND4P18-201ENST00000447010 465 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.15□□□□□ -1.42
CNOT4O95628 PTENP1-201ENST00000447117 1215 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.15□□□□□ -1.42
CNOT4O95628 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.15□□□□□ -1.42
CNOT4O95628 PSMA6P2-201ENST00000457574 686 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.15□□□□□ -1.42
CNOT4O95628 RPL23AP8-201ENST00000479812 475 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC079203.1-201ENST00000487972 404 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC026826.1-201ENST00000493002 361 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 RNA5SP278-201ENST00000517055 102 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.15□□□□□ -1.42
CNOT4O95628 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.15□□□□□ -1.42
CNOT4O95628 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNOT4O95628 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.15□□□□□ -1.42
CNOT4O95628 AC068020.1-201ENST00000594215 661 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.15□□□□□ -1.42
CNOT4O95628 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.15□□□□□ -1.42
CNOT4O95628 AC130352.1-201ENST00000602979 661 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC006840.1-201ENST00000623069 542 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 OR5BE1P-202ENST00000641168 1176 ntBASIC6.15□□□□□ -1.42
CNOT4O95628 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.15□□□□□ -1.42
CNOT4O95628 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.15□□□□□ -1.43
CNOT4O95628 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CNOT4O95628 AC104446.1-201ENST00000613728 1321 ntBASIC6.15□□□□□ -1.43
CNOT4O95628 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNOT4O95628 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CNOT4O95628 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CNOT4O95628 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.15□□□□□ -1.43
CNOT4O95628 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.15□□□□□ -1.43
CNOT4O95628 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.15□□□□□ -1.43
CNOT4O95628 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CNOT4O95628 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.15□□□□□ -1.43
CNOT4O95628 TPTE2P2-201ENST00000403471 1466 ntBASIC6.15□□□□□ -1.43
CNOT4O95628 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNOT4O95628 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CNOT4O95628 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CNOT4O95628 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.15□□□□□ -1.43
CNOT4O95628 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.14□□□□□ -1.43
CNOT4O95628 CDY19P-201ENST00000411668 1613 ntBASIC6.14□□□□□ -1.43
CNOT4O95628 CDY18P-201ENST00000438294 1609 ntBASIC6.14□□□□□ -1.43
CNOT4O95628 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CNOT4O95628 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CNOT4O95628 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CNOT4O95628 AC020658.2-201ENST00000559030 4020 ntBASIC6.14□□□□□ -1.43
CNOT4O95628 KARSP1-201ENST00000451871 1752 ntBASIC6.14□□□□□ -1.43
CNOT4O95628 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.14□□□□□ -1.43
CNOT4O95628 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CNOT4O95628 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms